C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 10b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042492 Tbc1d10b 10090 - 7:127197465-127208468 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000120705 Tbc1d10b-001 127197465-127208468 protein_coding
  ENSMUST00000124240 Tbc1d10b-002 127199362-127207747 processed_transcript
  ENSMUST00000133666 Tbc1d10b-005 127202953-127203474 retained_intron
  ENSMUST00000137987 Tbc1d10b-006 127199822-127200954 retained_intron
  ENSMUST00000138219 Tbc1d10b-003 127200253-127203694 retained_intron
  ENSMUST00000147520 Tbc1d10b-004 127199867-127203653 retained_intron
  ENSMUST00000153857 Tbc1d10b-007 127199057-127199985 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120705ENSMUST00000124240
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120705 10.245±1.66 13.514±1.16 7.502±1.88 10.327±5.26 13.604±4.01 14.840±2.54 3.340±0.96 8.210±0.97 6.752±5.02 11.884±2.00 6.004±2.25 13.127±4.01 29.924±15.03 1.254±0.45
ENSMUST00000124240 N/A N/A N/A 42.891±0.00 N/A N/A N/A N/A N/A N/A N/A 33.303±0.00 89.020±22.20 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WP CIL_0004WP_0002 CGP 7:127191660-127208468
CIL_0003V7 CIL_0003V7_0003 CGP 7:127197465-127214298

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 ISS Rab GTPase activator activity
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0032313 ISS regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0042147 IEA retrograde transport, endosome to Golgi

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078604 TBC1D10B TBC1 domain family, member 10B protein_coding Danio_rerio
ENSG00000169221 TBC1D10B TBC1 domain family, member 10B protein_coding Homo_sapiens

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