C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169255 B3GALNT1 9606 - 3:161083883-161105384 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320474 B3GALNT1-002 161083883-161105324 protein_coding
  ENST00000392779 B3GALNT1-001 161083883-161105370 protein_coding
  ENST00000392781 B3GALNT1-003 161083897-161105351 protein_coding
  ENST00000417187 B3GALNT1-006 161084991-161101167 protein_coding
  ENST00000460353 B3GALNT1-014 161086664-161105303 protein_coding
  ENST00000468268 B3GALNT1-013 161086422-161105303 protein_coding
  ENST00000473142 B3GALNT1-015 161086579-161105298 protein_coding
  ENST00000473285 B3GALNT1-005 161084983-161104549 protein_coding
  ENST00000476999 B3GALNT1-009 161090005-161105384 processed_transcript
  ENST00000478383 B3GALNT1-017 161090039-161105267 processed_transcript
  ENST00000484127 B3GALNT1-010 161086631-161105261 protein_coding
  ENST00000488170 B3GALNT1-004 161085759-161105140 protein_coding
  ENST00000492353 B3GALNT1-016 161086559-161105289 protein_coding
  ENST00000494173 B3GALNT1-007 161086666-161105384 protein_coding
  ENST00000494818 B3GALNT1-011 161101164-161105305 processed_transcript
  ENST00000496295 B3GALNT1-008 161086770-161105384 processed_transcript
  ENST00000497487 B3GALNT1-018 161103142-161105245 processed_transcript
  ENST00000498216 B3GALNT1-012 161086593-161104950 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENST00000320474ENST00000392779ENST00000392781
Transcript ID Adrenal Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000320474 N/A 2.120±0.00 4.867±0.58 1.334±0.00 5.770±2.44 1.696±0.00 3.326±0.95 N/A 4.620±0.12 2.631±0.00 4.660±0.00
ENST00000392779 2.246±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392781 N/A N/A 1.904±0.00 N/A N/A N/A N/A 0.310±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Z8 CIL_0001Z8_0001 CGP 3:160755602-161105384
CIL_0001Z9 CIL_0001Z9_0001 CGP 3:161083883-161253532

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0008378 IEA galactosyltransferase activity
GO:0008499 IEA UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity
GO:0009312 IEA oligosaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0047273 IEA galactosylgalactosylglucosylceramide beta-D-acetylgalactosaminyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000043300 B3galnt1 UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1 protein_coding Mus_musculus

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