C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320474 B3GALNT1-002 ENSG00000169255 9606 - 3:161083883-161105324 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverLungOvaryPlacentaTestisENST00000320474
Transcript ID Bladder Brain Breast Heart Liver Lung Ovary Placenta Testis
ENST00000320474 2.120±0.00 4.867±0.58 1.334±0.00 5.770±2.44 1.696±0.00 3.326±0.95 4.620±0.12 2.631±0.00 4.660±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Z8 CIL_0001Z8_0001 CGP 3:160755602-161105384
CIL_0001Z9 CIL_0001Z9_0001 CGP 3:161083883-161253532

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0008378 IEA galactosyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0047273 IEA galactosylgalactosylglucosylceramide beta-D-acetylgalactosaminyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061826 B3galnt1-201 protein_coding Mus_musculus 0 1223

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