C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001Z8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163590-ENSG00000169255 CGP 9606 3:160755602-161105384
GeneTranscriptPositionBiotype
ENSG00000163590 (PPM1L)
protein phosphatase, Mg2+/Mn2+ dependent, 1L 		ENST00000295839 (PPM1L-004) 160842227-161069856 protein_coding
ENST00000464260 (PPM1L-005) 160842213-161071028 protein_coding
ENST00000480117 (PPM1L-003) 160870598-161069844 processed_transcript
ENST00000497343 (PPM1L-002) 160755602-161022462 protein_coding
ENST00000498165 (PPM1L-001) 160756208-161078907 protein_coding
ENSG00000169251 (NMD3)
NMD3 ribosome export adaptor 		ENST00000351193 (NMD3-001) 161221290-161252307 protein_coding
ENST00000460469 (NMD3-005) 161221559-161252004 protein_coding
ENST00000460503 (NMD3-011) 161104822-161234836 protein_coding
ENST00000463518 (NMD3-009) 161221324-161238191 protein_coding
ENST00000468606 (NMD3-012) 161104696-161233416 protein_coding
ENST00000472947 (NMD3-002) 161221308-161253532 protein_coding
ENST00000473909 (NMD3-008) 161221288-161234905 retained_intron
ENST00000476237 (NMD3-010) 161221557-161234855 protein_coding
ENST00000478160 (NMD3-013) 161224930-161235331 processed_transcript
ENST00000493066 (NMD3-007) 161221262-161238191 protein_coding
ENSG00000169255 (B3GALNT1)
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 		ENST00000320474 (B3GALNT1-002) 161083883-161105324 protein_coding
ENST00000392779 (B3GALNT1-001) 161083883-161105370 protein_coding
ENST00000392781 (B3GALNT1-003) 161083897-161105351 protein_coding
ENST00000417187 (B3GALNT1-006) 161084991-161101167 protein_coding
ENST00000460353 (B3GALNT1-014) 161086664-161105303 protein_coding
ENST00000468268 (B3GALNT1-013) 161086422-161105303 protein_coding
ENST00000473142 (B3GALNT1-015) 161086579-161105298 protein_coding
ENST00000473285 (B3GALNT1-005) 161084983-161104549 protein_coding
ENST00000476999 (B3GALNT1-009) 161090005-161105384 processed_transcript
ENST00000478383 (B3GALNT1-017) 161090039-161105267 processed_transcript
ENST00000484127 (B3GALNT1-010) 161086631-161105261 protein_coding
ENST00000488170 (B3GALNT1-004) 161085759-161105140 protein_coding
ENST00000492353 (B3GALNT1-016) 161086559-161105289 protein_coding
ENST00000494173 (B3GALNT1-007) 161086666-161105384 protein_coding
ENST00000494818 (B3GALNT1-011) 161101164-161105305 processed_transcript
ENST00000496295 (B3GALNT1-008) 161086770-161105384 processed_transcript
ENST00000497487 (B3GALNT1-018) 161103142-161105245 processed_transcript
ENST00000498216 (B3GALNT1-012) 161086593-161104950 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0001Z8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027784-ENSMUSG00000043300 CGP 10090 3:69316861-69598861
GeneTranscriptPositionBiotype
ENSMUSG00000027784 (Ppm1l)
protein phosphatase 1 (formerly 2C)-like 		ENSMUST00000029355 (Ppm1l-001) 69316861-69560802 protein_coding
ENSMUST00000128637 (Ppm1l-003) 69548979-69553099 retained_intron
ENSMUST00000134037 (Ppm1l-002) 69542432-69552918 protein_coding
ENSMUSG00000043300 (B3galnt1)
UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1 		ENSMUST00000061826 (B3galnt1-201) 69574186-69598861 protein_coding
ENSMUSG00000090743 (Gm17213)
predicted gene 17213 		ENSMUST00000165161 (Gm17213-001) 69431009-69432368 processed_pseudogene
ENSMUSG00000090941 (Gm17212)
predicted gene 17212 		ENSMUST00000166666 (Gm17212-001) 69335502-69335760 processed_pseudogene
ENSMUSG00000091315 (Gm17214)
predicted gene 17214 		ENSMUST00000164501 (Gm17214-001) 69320045-69320585 processed_pseudogene
ENSMUSG00000098006 (Gm8565)
predicted gene 8565 		ENSMUST00000183259 (Gm8565-001) 69566451-69567464 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Z8_0001ENSG00000163590ENST00000295839ENST00000497343ENST00000498165ENSG00000169251ENST00000351193ENST00000460469ENST00000472947ENSG00000169255ENST00000320474ENST00000392779ENST00000392781CIL_0001Z8_0002ENSMUSG00000027784ENSMUST00000029355ENSMUSG00000043300ENSMUST00000061826ENSMUSG00000090743ENSMUST00000165161ENSMUSG00000090941ENSMUST00000166666ENSMUSG00000091315ENSMUST00000164501ENSMUSG00000098006ENSMUST00000183259
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163590 ENST00000295839 N/A N/A N/A N/A N/A N/A N/A 0.537±0.00 N/A N/A N/A N/A N/A N/A
ENST00000464260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497343 N/A N/A 6.553±0.00 N/A 3.261±0.00 3.545±0.00 3.995±0.00 1.006±0.00 10.670±0.00 1.550±0.00 8.158±0.00 N/A N/A N/A
ENST00000498165 2.511±0.00 0.578±0.00 1.821±0.00 6.572±1.42 2.058±0.07 2.491±1.35 2.878±0.74 1.095±0.64 3.371±2.38 1.092±0.31 3.229±0.00 0.644±0.39 2.097±0.27 1.033±0.54
ENSG00000169251 ENST00000351193 12.096±0.00 8.603±0.00 1.601±0.00 6.434±1.63 8.567±1.00 7.201±4.80 8.416±2.80 12.864±0.00 7.657±0.41 11.048±1.68 5.441±2.85 9.655±1.11 5.925±2.30 7.792±2.74
ENST00000460469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.144±0.00 N/A 3.910±0.00
ENST00000460503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472947 N/A N/A N/A N/A N/A N/A N/A 3.016±0.00 N/A N/A N/A N/A N/A N/A
ENST00000473909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169255 ENST00000320474 N/A N/A 2.120±0.00 4.867±0.58 1.334±0.00 N/A 5.770±2.44 N/A 1.696±0.00 3.326±0.95 N/A 4.620±0.12 2.631±0.00 4.660±0.00
ENST00000392779 N/A 2.246±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392781 N/A N/A N/A 1.904±0.00 N/A N/A N/A N/A N/A N/A 0.310±0.00 N/A N/A N/A
ENST00000417187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027784 ENSMUST00000029355 3.262±1.86 2.763±0.31 3.741±0.46 7.044±1.30 2.232±0.77 1.876±0.21 3.686±0.70 2.185±0.24 1.753±0.54 2.890±0.55 12.498±1.33 4.403±0.71 0.640±0.30 0.719±0.23
ENSMUST00000128637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000043300 ENSMUST00000061826 11.051±1.89 6.501±2.33 6.397±0.50 10.667±2.53 8.259±0.44 3.314±0.35 1.116±0.28 16.161±1.87 0.760±0.44 3.576±1.12 0.680±0.13 16.786±6.66 3.714±2.26 5.834±1.63
ENSMUSG00000090743 ENSMUST00000165161 0.062±0.03 N/A N/A N/A N/A 0.196±0.04 0.037±0.01 0.094±0.00 0.105±0.07 0.046±0.01 N/A 0.065±0.07 0.020±0.00 0.062±0.00
ENSMUSG00000090941 ENSMUST00000166666 0.589±0.00 N/A N/A 0.494±0.00 N/A N/A 0.383±0.00 0.563±0.00 0.189±0.00 N/A N/A N/A N/A 0.418±0.00
ENSMUSG00000091315 ENSMUST00000164501 0.222±0.00 N/A 0.087±0.00 0.601±0.00 0.492±0.26 N/A 0.099±0.00 0.107±0.00 0.171±0.10 N/A N/A 0.495±0.02 0.081±0.03 0.136±0.05
ENSMUSG00000098006 ENSMUST00000183259 0.155±0.04 0.095±0.00 0.206±0.06 0.234±0.12 0.284±0.33 0.097±0.00 0.081±0.05 0.093±0.02 0.114±0.19 0.042±0.00 0.228±0.13 0.154±0.09 0.048±0.02 N/A

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