C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0001Z9_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000169255-ENSG00000169251 | CGP | 9606 | 3:161083883-161253532  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000169251  (NMD3)NMD3 ribosome export adaptor |
ENST00000351193 (NMD3-001)
|
161221290-161252307 | protein_coding | |
|
ENST00000460469 (NMD3-005)
|
161221559-161252004 | protein_coding | ||
|
ENST00000460503 (NMD3-011)
|
161104822-161234836 | protein_coding | ||
|
ENST00000463518 (NMD3-009)
|
161221324-161238191 | protein_coding | ||
|
ENST00000468606 (NMD3-012)
|
161104696-161233416 | protein_coding | ||
|
ENST00000472947 (NMD3-002)
|
161221308-161253532 | protein_coding | ||
|
ENST00000473909 (NMD3-008)
|
161221288-161234905 | retained_intron | ||
|
ENST00000476237 (NMD3-010)
|
161221557-161234855 | protein_coding | ||
|
ENST00000478160 (NMD3-013)
|
161224930-161235331 | processed_transcript | ||
|
ENST00000493066 (NMD3-007)
|
161221262-161238191 | protein_coding | ||
|
ENSG00000169255 (B3GALNT1) beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) |
ENST00000320474 (B3GALNT1-002)
|
161083883-161105324 | protein_coding | |
|
ENST00000392779 (B3GALNT1-001)
|
161083883-161105370 | protein_coding | ||
|
ENST00000392781 (B3GALNT1-003)
|
161083897-161105351 | protein_coding | ||
|
ENST00000417187 (B3GALNT1-006)
|
161084991-161101167 | protein_coding | ||
|
ENST00000460353 (B3GALNT1-014)
|
161086664-161105303 | protein_coding | ||
|
ENST00000468268 (B3GALNT1-013)
|
161086422-161105303 | protein_coding | ||
|
ENST00000473142 (B3GALNT1-015)
|
161086579-161105298 | protein_coding | ||
|
ENST00000473285 (B3GALNT1-005)
|
161084983-161104549 | protein_coding | ||
|
ENST00000476999 (B3GALNT1-009)
|
161090005-161105384 | processed_transcript | ||
|
ENST00000478383 (B3GALNT1-017)
|
161090039-161105267 | processed_transcript | ||
|
ENST00000484127 (B3GALNT1-010)
|
161086631-161105261 | protein_coding | ||
|
ENST00000488170 (B3GALNT1-004)
|
161085759-161105140 | protein_coding | ||
|
ENST00000492353 (B3GALNT1-016)
|
161086559-161105289 | protein_coding | ||
|
ENST00000494173 (B3GALNT1-007)
|
161086666-161105384 | protein_coding | ||
|
ENST00000494818 (B3GALNT1-011)
|
161101164-161105305 | processed_transcript | ||
|
ENST00000496295 (B3GALNT1-008)
|
161086770-161105384 | processed_transcript | ||
|
ENST00000497487 (B3GALNT1-018)
|
161103142-161105245 | processed_transcript | ||
|
ENST00000498216 (B3GALNT1-012)
|
161086593-161104950 | protein_coding | ||
|
ENSG00000271052 (RP11-479I16.2) |
ENST00000603703 (RP11-479I16.2-001)
|
161222911-161223147 | processed_pseudogene | |
| CIL_0001Z9_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000043300-ENSMUSG00000027787 | CGP | 10090 | 3:69574186-69749042 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000027787 (Nmd3) NMD3 homolog (S. cerevisiae) |
ENSMUST00000029358 (Nmd3-001)
|
69721985-69749042 | protein_coding | |
|
ENSMUST00000127211 (Nmd3-002)
|
69722090-69731976 | retained_intron | ||
|
ENSMUST00000135266 (Nmd3-005)
|
69722083-69730533 | processed_transcript | ||
|
ENSMUST00000143041 (Nmd3-003)
|
69722032-69735089 | nonsense_mediated_decay | ||
|
ENSMUST00000143249 (Nmd3-006)
|
69722255-69726409 | protein_coding | ||
|
ENSMUST00000149680 (Nmd3-004)
|
69721985-69724461 | retained_intron | ||
|
ENSMUST00000150210 (Nmd3-007)
|
69746432-69749042 | retained_intron | ||
|
ENSMUSG00000043300 (B3galnt1) UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1 |
ENSMUST00000061826 (B3galnt1-201)
|
69574186-69598861 | protein_coding | |
|
ENSMUSG00000068969 (Rpl32-ps) ribosomal protein L32, pseudogene |
ENSMUST00000091052 (Rpl32-ps-201)
|
69716986-69717393 | processed_pseudogene | |
Expression Patterns
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