C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: basonuclin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169594 BNC1 9606 - 15:83255903-83284716 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000345382 BNC1-001 83255903-83284714 protein_coding
  ENST00000569704 BNC1-003 83257344-83283319 protein_coding
  ENST00000618086 BNC1-201 83255905-83284716 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000345382ENST00000569704ENST00000618086
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000345382 0.010±0.00 N/A 0.012±0.00 0.054±0.00 N/A 0.045±0.01 0.019±0.00 0.020±0.00 0.056±0.03 0.133±0.07 0.269±0.11
ENST00000569704 N/A 0.015±0.00 N/A N/A 0.070±0.02 N/A 0.074±0.00 N/A 0.102±0.05 0.211±0.16 N/A
ENST00000618086 0.010±0.00 N/A 0.012±0.00 0.054±0.00 N/A 0.047±0.00 0.019±0.00 0.021±0.00 0.058±0.03 0.135±0.07 0.296±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037Q CIL_00037Q_0001 CGP 15:83112738-83284716
CIL_0006KR CIL_0006KR_0001 CGP 15:83255903-83618743

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006356 IEA regulation of transcription from RNA polymerase I promoter
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0008284 TAS positive regulation of cell proliferation
GO:0008544 TAS epidermis development
GO:0042060 IEA wound healing
GO:0046872 IEA metal ion binding
GO:0050679 IEA positive regulation of epithelial cell proliferation
GO:0051276 IEA chromosome organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074397 BNC1 basonuclin 1 protein_coding Danio_rerio
ENSMUSG00000025105 Bnc1 basonuclin 1 protein_coding Mus_musculus

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