C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basonuclin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000345382 BNC1-001 ENSG00000169594 9606 - 15:83255903-83284714 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungOvaryPlacentaENST00000345382
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Ovary Placenta
ENST00000345382 0.010±0.00 0.012±0.00 0.054±0.00 0.045±0.01 0.019±0.00 0.020±0.00 0.056±0.03 0.133±0.07 0.269±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037Q CIL_00037Q_0001 CGP 15:83112738-83284716
CIL_0006KR CIL_0006KR_0001 CGP 15:83255903-83618743

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006356 IEA regulation of transcription from RNA polymerase I promoter
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0008284 TAS positive regulation of cell proliferation
GO:0008544 TAS epidermis development
GO:0042060 IEA wound healing
GO:0046872 IEA metal ion binding
GO:0050679 IEA positive regulation of epithelial cell proliferation
GO:0051276 IEA chromosome organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026096 Bnc1-201 protein_coding Mus_musculus 0 3559

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