C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spinster homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169682 SPNS1 9606 + 16:28974221-28984548 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000311008 SPNS1-001 28974775-28984543 protein_coding
  ENST00000323081 SPNS1-002 28974794-28984543 protein_coding
  ENST00000334536 SPNS1-006 28974801-28984544 protein_coding
  ENST00000352260 SPNS1-005 28974813-28984543 protein_coding
  ENST00000561868 SPNS1-010 28975502-28982375 processed_transcript
  ENST00000564476 SPNS1-012 28975198-28984058 protein_coding
  ENST00000565975 SPNS1-003 28974772-28984548 protein_coding
  ENST00000566059 SPNS1-007 28975185-28984517 protein_coding
  ENST00000567771 SPNS1-008 28974221-28979244 protein_coding
  ENST00000568388 SPNS1-009 28974321-28979455 protein_coding
  ENST00000568829 SPNS1-011 28977938-28984540 protein_coding
  ENST00000568900 SPNS1-004 28974778-28980687 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000311008ENST00000323081ENST00000334536ENST00000564476ENST00000565975ENST00000566059ENST00000567771ENST00000568388ENST00000568900
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000311008 20.631±0.00 N/A 0.167±0.00 N/A 6.357±0.00 11.125±0.00 0.515±0.00 7.586±6.70 4.430±0.00 11.834±0.00 N/A 19.666±2.35 25.219±3.94 11.568±0.00
ENST00000323081 N/A 16.757±0.00 N/A 1.924±1.39 6.549±0.00 1.960±1.58 5.476±0.00 N/A 2.158±0.00 3.648±2.41 5.290±0.00 9.856±7.62 16.069±3.78 8.544±0.00
ENST00000334536 N/A N/A N/A 1.271±0.63 N/A N/A N/A N/A 1.237±0.00 N/A N/A N/A N/A N/A
ENST00000564476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.023±0.00 N/A N/A N/A
ENST00000565975 N/A 15.943±0.00 N/A 1.734±0.87 10.219±0.00 N/A 1.329±1.13 4.950±2.57 2.761±0.00 N/A 3.873±0.00 N/A 8.846±1.18 6.095±1.66
ENST00000566059 N/A N/A N/A N/A 0.492±0.00 0.796±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567771 N/A N/A 1.135±0.00 N/A 1.449±0.00 0.759±0.00 N/A N/A N/A N/A N/A 3.336±0.00 N/A N/A
ENST00000568388 N/A N/A N/A N/A N/A N/A N/A 1.835±0.00 N/A N/A N/A N/A N/A N/A
ENST00000568900 N/A N/A N/A 0.959±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IPI protein binding
GO:0005743 IEA mitochondrial inner membrane
GO:0005765 IDA lysosomal membrane
GO:0006810 IEA transport
GO:0006869 IEA lipid transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011925 spns1 spinster homolog 1 (Drosophila) protein_coding Danio_rerio
ENSMUSG00000030741 Spns1 spinster homolog 1 protein_coding Mus_musculus

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