C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spinster homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000323081 SPNS1-002 ENSG00000169682 9606 + 16:28974794-28984543 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000323081
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000323081 16.757±0.00 1.924±1.39 6.549±0.00 1.960±1.58 5.476±0.00 2.158±0.00 3.648±2.41 5.290±0.00 9.856±7.62 16.069±3.78 8.544±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005743 IEA mitochondrial inner membrane
GO:0005765 IDA lysosomal membrane
GO:0006869 IEA lipid transport
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032994 Spns1-001 protein_coding Mus_musculus 0 1871
ENSMUST00000119754 Spns1-005 protein_coding Mus_musculus 0 1528
ENSMUST00000138141 Spns1-004 nonsense_mediated_decay Mus_musculus 0 1267
ENSMUST00000126810 Spns1-002 retained_intron Mus_musculus 0 1197
ENSMUST00000150476 Spns1-006 protein_coding Mus_musculus 0 941
ENSMUST00000119846 Spns1-003 protein_coding Mus_musculus 0 939
ENSMUST00000137263 Spns1-008 retained_intron Mus_musculus 0 551
ENSMUST00000152000 Spns1-009 retained_intron Mus_musculus 0 398
ENSMUST00000150748 Spns1-007 retained_intron Mus_musculus 0 305

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