C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein, FOG family member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169946 ZFPM2 9606 + 8:104590733-105804532 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000407775 ZFPM2-002 105318692-105804532 protein_coding
  ENST00000511341 ZFPM2-003 105387146-105789027 processed_transcript
  ENST00000517361 ZFPM2-004 105528884-105803597 protein_coding
  ENST00000518180 ZFPM2-009 104703719-105419260 processed_transcript
  ENST00000520027 ZFPM2-005 105358478-105634299 protein_coding
  ENST00000520492 ZFPM2-001 105319543-105803870 protein_coding
  ENST00000521923 ZFPM2-010 104590733-104895717 processed_transcript
  ENST00000522160 ZFPM2-007 105419144-105451764 processed_transcript
  ENST00000522296 ZFPM2-008 105690890-105803600 processed_transcript
  ENST00000524235 ZFPM2-006 105358517-105561422 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000407775ENST00000517361ENST00000520027ENST00000520492ENST00000521923ENST00000522296
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000407775 1.584±0.00 1.211±0.00 N/A 2.792±0.84 0.893±0.58 0.849±0.00 2.198±1.75 0.271±0.00 0.527±0.19 2.380±0.00 4.351±0.00 4.855±5.00 1.025±0.14 2.133±1.22
ENST00000517361 0.531±0.00 N/A N/A 1.376±0.13 0.617±0.00 0.906±0.17 1.942±0.00 N/A 2.170±0.00 0.544±0.00 3.264±1.56 1.008±0.00 N/A 0.503±0.00
ENST00000520027 N/A N/A N/A N/A N/A N/A 1.812±0.00 N/A N/A N/A N/A 3.595±0.00 N/A 2.545±0.00
ENST00000520492 0.692±0.00 N/A 0.616±0.00 N/A N/A N/A N/A N/A 2.735±0.00 1.855±0.00 N/A 3.390±0.00 N/A N/A
ENST00000521923 N/A N/A N/A N/A N/A N/A N/A 0.683±0.00 N/A N/A N/A N/A N/A N/A
ENST00000522296 N/A N/A N/A N/A N/A N/A N/A 0.403±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OF CIL_0007OF_0001 UCNEbase 8:104531728-105804547
CIL_0008AI CIL_0008AI_0001 VISTA 8:104568632-105169919
CIL_00060E CIL_00060E_0001 CGP 8:104590733-106752694

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001105 NAS RNA polymerase II transcription coactivator activity
GO:0001570 IEA vasculogenesis
GO:0001701 IEA in utero embryonic development
GO:0003148 IMP outflow tract septum morphogenesis
GO:0003221 IMP right ventricular cardiac muscle tissue morphogenesis
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007506 IEA gonadal mesoderm development
GO:0007507 IEA heart development
GO:0007596 TAS blood coagulation
GO:0008134 IPI transcription factor binding
GO:0008270 NAS zinc ion binding
GO:0030324 IEA lung development
GO:0045599 IMP negative regulation of fat cell differentiation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0048568 IEA embryonic organ development
GO:0048738 IEA cardiac muscle tissue development
GO:0060412 IMP ventricular septum morphogenesis
GO:0060548 IEA negative regulation of cell death
GO:2000020 IEA positive regulation of male gonad development
GO:2000195 IEA negative regulation of female gonad development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040123 zfpm2a zinc finger protein, multitype 2a protein_coding Danio_rerio
ENSMUSG00000022306 Zfpm2 zinc finger protein, multitype 2 protein_coding Mus_musculus

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