C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007OF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ZFPM2 UCNEbase 9606 8:104531728-105804547
GeneTranscriptPositionBiotype
ENSG00000147650 (LRP12)
low density lipoprotein receptor-related protein 12 		ENST00000276654 (LRP12-001) 104489250-104589006 protein_coding
ENST00000424843 (LRP12-002) 104489231-104589024 protein_coding
ENST00000518375 (LRP12-006) 104489256-104496142 processed_transcript
ENST00000519675 (LRP12-003) 104504244-104588995 retained_intron
ENST00000520770 (LRP12-007) 104497754-104589009 processed_transcript
ENST00000522046 (LRP12-005) 104491421-104495750 processed_transcript
ENST00000523007 (LRP12-004) 104491418-104497605 protein_coding
ENSG00000169946 (ZFPM2)
zinc finger protein, FOG family member 2 		ENST00000407775 (ZFPM2-002) 105318692-105804532 protein_coding
ENST00000511341 (ZFPM2-003) 105387146-105789027 processed_transcript
ENST00000517361 (ZFPM2-004) 105528884-105803597 protein_coding
ENST00000518180 (ZFPM2-009) 104703719-105419260 processed_transcript
ENST00000520027 (ZFPM2-005) 105358478-105634299 protein_coding
ENST00000520492 (ZFPM2-001) 105319543-105803870 protein_coding
ENST00000521923 (ZFPM2-010) 104590733-104895717 processed_transcript
ENST00000522160 (ZFPM2-007) 105419144-105451764 processed_transcript
ENST00000522296 (ZFPM2-008) 105690890-105803600 processed_transcript
ENST00000524235 (ZFPM2-006) 105358517-105561422 processed_transcript
ENSG00000240271 (RP11-200A13.2)
 ENST00000465776 (RP11-200A13.2-001) 105011107-105011568 processed_pseudogene
ENSG00000243171 (RP11-273P3.1)
 ENST00000485656 (RP11-273P3.1-001) 105287830-105288365 processed_pseudogene
ENSG00000243601 (RPL12P24)
ribosomal protein L12 pseudogene 24 		ENST00000474907 (RPL12P24-001) 105737280-105737765 processed_pseudogene
ENSG00000243939 (RP11-200A13.1)
 ENST00000483263 (RP11-200A13.1-001) 104981164-104981579 processed_pseudogene
ENSG00000251003 (ZFPM2-AS1)
ZFPM2 antisense RNA 1 		ENST00000509144 (ZFPM2-AS1-005) 105796940-106060443 antisense
ENST00000518932 (ZFPM2-AS1-004) 105785055-105911869 antisense
ENST00000520078 (ZFPM2-AS1-003) 105798091-106060461 retained_intron
ENST00000520433 (ZFPM2-AS1-007) 105780246-106060524 antisense
ENST00000520594 (ZFPM2-AS1-006) 105785004-106060467 antisense
ENST00000521622 (ZFPM2-AS1-002) 105798327-106060491 antisense
ENST00000524045 (ZFPM2-AS1-001) 105784805-106060477 antisense
ENSG00000253318 (TMCC1P1)
transmembrane and coiled-coil domain family 1 pseudogene 1 		ENST00000518897 (TMCC1P1-001) 105194990-105196969 processed_pseudogene
ENSG00000253420 (RP11-642D21.2)
 ENST00000520588 (RP11-642D21.2-001) 105662352-105685765 antisense
ENSG00000253454 (NDUFA5P2)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 pseudogene 2 		ENST00000519723 (NDUFA5P2-001) 104566086-104566429 processed_pseudogene
ENSG00000254041 (RP11-574O7.1)
 ENST00000518927 (RP11-574O7.1-001) 105142860-105188606 antisense
ENSG00000254141 (RP11-642D21.1)
 ENST00000519805 (RP11-642D21.1-001) 105669991-105679031 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0007OF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ZFPM2 UCNEbase 10090 15:39904375-41104588
GeneTranscriptPositionBiotype
ENSMUSG00000022305 (Lrp12)
low density lipoprotein-related protein 12 		ENSMUST00000022916 (Lrp12-001) 39870603-39943788 protein_coding
ENSMUST00000110305 (Lrp12-002) 39870603-39943994 protein_coding
ENSMUST00000146714 (Lrp12-003) 39904266-39943706 retained_intron
ENSMUSG00000022306 (Zfpm2)
zinc finger protein, multitype 2 		ENSMUST00000053467 (Zfpm2-201) 40655042-41104592 protein_coding
ENSMUSG00000056332 (Gm16294)
predicted gene 16294 		ENSMUST00000070382 (Gm16294-001) 40511322-40527277 lincRNA
ENSMUSG00000094112 (9330182O14Rik)
RIKEN cDNA 9330182O14 gene 		ENSMUST00000179120 (9330182O14Rik-201) 40142188-40148689 protein_coding

Mus musculus Ensembl (GRCm38)

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CIL_0007OF_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ZFPM2 UCNEbase 7955 16:46671724-47098680
GeneTranscriptPositionBiotype
ENSDARG00000040123 (zfpm2a)
zinc finger protein, multitype 2a 		ENSDART00000058685 (zfpm2a-201) 46672695-46980190 protein_coding
ENSDART00000104583 (zfpm2a-202) 46805992-46980290 protein_coding
ENSDART00000141941 (zfpm2a-001) 46671678-46824040 protein_coding
ENSDART00000151936 (zfpm2a-002) 46874619-46980291 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0007OF_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ZFPM2 UCNEbase 7955 19:17248840-17362243
GeneTranscriptPositionBiotype
ENSDARG00000035997 (zfpm2b)
zinc finger protein, multitype 2b 		ENSDART00000052260 (zfpm2b-001) 17288391-17380983 protein_coding
ENSDART00000103745 (zfpm2b-002) 17288407-17381914 protein_coding

Danio rerio Ensembl (Zv9)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007OF_0001ENSG00000147650ENST00000276654ENST00000424843ENST00000518375ENST00000519675ENST00000520770ENST00000522046ENST00000523007ENSG00000169946ENST00000407775ENST00000511341ENST00000517361ENST00000518180ENST00000520027ENST00000520492ENST00000521923ENST00000522160ENST00000522296ENST00000524235ENSG00000240271ENST00000465776ENSG00000243171ENST00000485656ENSG00000243601ENST00000474907ENSG00000243939ENST00000483263ENSG00000251003ENST00000509144ENST00000518932ENST00000520078ENST00000520433ENST00000520594ENST00000521622ENST00000524045ENSG00000253318ENST00000518897ENSG00000253420ENST00000520588ENSG00000253454ENST00000519723ENSG00000254041ENST00000518927ENSG00000254141ENST00000519805CIL_0007OF_0002ENSMUSG00000022305ENSMUST00000022916ENSMUST00000110305ENSMUST00000146714ENSMUSG00000022306ENSMUST00000053467ENSMUSG00000056332ENSMUST00000070382ENSMUSG00000094112ENSMUST00000179120CIL_0007OF_0003ENSDARG00000040123ENSDART00000058685ENSDART00000104583ENSDART00000141941ENSDART00000151936CIL_0007OF_0004ENSDARG00000035997ENSDART00000052260ENSDART00000103745
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007OF_0001ENSG00000147650ENST00000276654ENST00000424843ENST00000518375ENST00000519675ENST00000520770ENST00000523007ENSG00000169946ENST00000407775ENST00000517361ENST00000520027ENST00000520492ENST00000521923ENST00000522296ENSG00000240271ENST00000465776ENSG00000243171ENST00000485656ENSG00000243601ENST00000474907ENSG00000243939ENST00000483263ENSG00000251003ENST00000509144ENST00000518932ENST00000520078ENST00000520433ENST00000520594ENST00000521622ENST00000524045ENSG00000253318ENST00000518897ENSG00000253420ENST00000520588ENSG00000253454ENST00000519723ENSG00000254041ENST00000518927ENSG00000254141ENST00000519805CIL_0007OF_0002ENSMUSG00000022305ENSMUST00000022916ENSMUST00000110305ENSMUSG00000022306ENSMUST00000053467ENSMUSG00000056332ENSMUST00000070382ENSMUSG00000094112ENSMUST00000179120CIL_0007OF_0003ENSDARG00000040123ENSDART00000058685ENSDART00000141941CIL_0007OF_0004ENSDARG00000035997ENSDART00000052260ENSDART00000103745
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147650 ENST00000276654 1.779±0.00 0.815±0.00 0.561±0.00 2.507±0.89 1.412±0.00 0.561±0.00 2.939±1.39 1.443±0.00 0.832±0.80 1.144±0.25 1.375±0.00 1.049±0.58 0.595±0.00 2.209±0.43
ENST00000424843 N/A 0.683±0.00 0.398±0.00 3.511±0.39 1.156±0.49 1.373±0.43 1.172±0.00 0.849±0.00 0.657±0.50 1.249±0.27 0.772±0.47 1.020±0.52 1.016±0.46 0.686±0.00
ENST00000518375 N/A 0.262±0.00 N/A N/A 0.767±0.00 N/A N/A N/A 0.032±0.00 0.393±0.00 0.433±0.00 0.522±0.00 0.285±0.00 0.732±0.00
ENST00000519675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.217±0.00
ENST00000520770 N/A N/A N/A N/A N/A N/A N/A 0.552±0.00 N/A N/A 1.912±0.00 N/A N/A N/A
ENST00000522046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523007 N/A N/A N/A N/A 1.748±0.00 N/A N/A 0.572±0.00 N/A N/A 0.718±0.00 0.989±0.53 N/A 2.604±0.00
ENSG00000169946 ENST00000407775 1.584±0.00 1.211±0.00 N/A 2.792±0.84 0.893±0.58 0.849±0.00 2.198±1.75 0.271±0.00 0.527±0.19 2.380±0.00 4.351±0.00 4.855±5.00 1.025±0.14 2.133±1.22
ENST00000511341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517361 0.531±0.00 N/A N/A 1.376±0.13 0.617±0.00 0.906±0.17 1.942±0.00 N/A 2.170±0.00 0.544±0.00 3.264±1.56 1.008±0.00 N/A 0.503±0.00
ENST00000518180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520027 N/A N/A N/A N/A N/A N/A 1.812±0.00 N/A N/A N/A N/A 3.595±0.00 N/A 2.545±0.00
ENST00000520492 0.692±0.00 N/A 0.616±0.00 N/A N/A N/A N/A N/A 2.735±0.00 1.855±0.00 N/A 3.390±0.00 N/A N/A
ENST00000521923 N/A N/A N/A N/A N/A N/A N/A 0.683±0.00 N/A N/A N/A N/A N/A N/A
ENST00000522160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522296 N/A N/A N/A N/A N/A N/A N/A 0.403±0.00 N/A N/A N/A N/A N/A N/A
ENST00000524235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240271 ENST00000465776 N/A N/A N/A 0.044±0.00 N/A 0.117±0.00 N/A N/A 0.070±0.00 0.039±0.00 0.476±0.37 0.063±0.00 N/A 0.036±0.00
ENSG00000243171 ENST00000485656 N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243601 ENST00000474907 N/A N/A N/A N/A 0.084±0.00 0.613±0.00 0.151±0.02 N/A 0.467±0.00 0.730±0.00 N/A N/A N/A N/A
ENSG00000243939 ENST00000483263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.199±0.00 N/A N/A 0.032±0.00
ENSG00000251003 ENST00000509144 N/A N/A N/A 0.928±0.00 0.253±0.00 0.147±0.00 0.029±0.00 0.193±0.00 N/A 0.744±0.67 N/A 0.303±0.00 0.219±0.10 0.166±0.07
ENST00000518932 N/A 0.094±0.00 N/A 0.058±0.00 N/A 0.052±0.00 N/A N/A N/A N/A N/A 0.433±0.32 0.151±0.00 0.158±0.07
ENST00000520078 N/A 0.233±0.00 N/A 0.202±0.00 N/A 0.149±0.00 0.063±0.00 N/A 0.070±0.00 N/A 0.023±0.00 0.364±0.10 N/A 0.075±0.00
ENST00000520433 N/A N/A N/A N/A 0.148±0.00 0.129±0.00 N/A N/A 0.320±0.00 N/A N/A 0.303±0.12 0.066±0.00 0.086±0.00
ENST00000520594 0.172±0.00 N/A N/A N/A 0.293±0.16 N/A N/A 0.821±0.00 N/A N/A N/A 0.080±0.00 0.157±0.05 0.099±0.00
ENST00000521622 N/A N/A N/A N/A N/A N/A N/A N/A 0.198±0.00 N/A N/A N/A N/A N/A
ENST00000524045 0.190±0.00 N/A 0.132±0.00 N/A 0.107±0.00 N/A 0.022±0.00 0.333±0.00 0.057±0.00 N/A N/A 0.149±0.00 0.098±0.00 0.046±0.00
ENSG00000253318 ENST00000518897 N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253420 ENST00000520588 0.073±0.00 N/A N/A 0.047±0.00 0.235±0.00 N/A 0.035±0.00 0.277±0.00 N/A 0.543±0.00 0.178±0.16 0.139±0.00 0.040±0.00 N/A
ENSG00000253454 ENST00000519723 N/A N/A N/A N/A 0.481±0.42 0.030±0.00 N/A 0.032±0.00 0.030±0.00 N/A N/A 0.044±0.00 N/A 0.029±0.00
ENSG00000254041 ENST00000518927 0.049±0.00 0.110±0.00 N/A 0.155±0.00 0.100±0.05 0.089±0.00 N/A N/A 0.104±0.00 N/A N/A 0.031±0.00 0.040±0.00 0.282±0.14
ENSG00000254141 ENST00000519805 0.031±0.00 0.092±0.00 N/A 0.351±0.34 N/A N/A 0.142±0.00 N/A N/A N/A 0.188±0.00 0.041±0.00 0.046±0.00 0.197±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022305 ENSMUST00000022916 2.365±1.08 1.357±0.49 1.425±0.29 9.043±0.10 0.944±0.15 1.288±0.29 0.553±0.13 1.257±0.20 0.569±0.27 1.711±0.33 0.593±0.20 2.353±1.04 4.196±1.76 3.535±0.99
ENSMUST00000110305 0.257±0.03 0.370±0.12 N/A N/A 0.251±0.13 0.639±0.24 0.087±0.00 0.229±0.00 0.167±0.10 0.202±0.00 0.386±0.03 0.645±0.25 0.767±0.37 0.650±0.11
ENSMUST00000146714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022306 ENSMUST00000053467 1.622±0.90 0.810±0.25 1.841±0.14 4.492±2.02 0.590±0.25 0.474±0.08 2.587±0.14 0.349±0.09 0.205±0.11 0.790±0.19 0.053±0.02 3.381±0.90 0.225±0.18 1.513±0.36
ENSMUSG00000056332 ENSMUST00000070382 N/A 0.178±0.00 N/A 0.067±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.02
ENSMUSG00000094112 ENSMUST00000179120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A 0.487±0.15
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040123 ENSDART00000058685 N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A
ENSDART00000104583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141941 N/A N/A N/A 10.853±3.17 N/A N/A 3.935±1.16 0.256±0.00 0.033±0.00 N/A N/A N/A N/A N/A
ENSDART00000151936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035997 ENSDART00000052260 N/A N/A N/A 0.758±0.00 N/A N/A 0.139±0.04 0.412±0.00 0.021±0.00 N/A 0.148±0.00 N/A N/A N/A
ENSDART00000103745 N/A N/A N/A 2.731±1.25 N/A N/A 0.649±0.31 0.678±0.44 0.021±0.00 N/A 0.249±0.00 N/A N/A N/A

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