C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008CW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1702 VISTA 9606 1:18332177-18933790
GeneTranscriptPositionBiotype
ENSG00000117154 (IGSF21)
immunoglobin superfamily, member 21 		ENST00000251296 (IGSF21-001) 18107746-18378482 protein_coding
ENST00000412684 (IGSF21-002) 18278845-18376367 protein_coding
ENST00000473951 (IGSF21-004) 18375957-18376920 processed_transcript
ENST00000497331 (IGSF21-003) 18361367-18378483 retained_intron
ENSG00000159423 (ALDH4A1)
aldehyde dehydrogenase 4 family, member A1 		ENST00000290597 (ALDH4A1-002) 18871430-18902553 protein_coding
ENST00000375341 (ALDH4A1-001) 18871432-18902781 protein_coding
ENST00000432718 (ALDH4A1-003) 18883111-18902724 protein_coding
ENST00000454547 (ALDH4A1-004) 18882560-18885619 processed_transcript
ENST00000538309 (ALDH4A1-005) 18872733-18890891 protein_coding
ENST00000538839 (ALDH4A1-201) 18871432-18902528 protein_coding
ENSG00000169991 (IFFO2)
intermediate filament family orphan 2 		ENST00000355609 (IFFO2-003) 18908291-18911992 protein_coding
ENST00000416166 (IFFO2-002) 18908340-18955698 protein_coding
ENST00000455833 (IFFO2-001) 18904281-18956686 protein_coding
ENSG00000179023 (KLHDC7A)
kelch domain containing 7A 		ENST00000400664 (KLHDC7A-001) 18480982-18486126 protein_coding
ENSG00000225387 (RP11-422P22.1)
 ENST00000420211 (RP11-422P22.1-001) 18385829-18388514 lincRNA
ENSG00000235282 (DYNLL1P3)
dynein, light chain, LC8-type 1 pseudogene 3 		ENST00000596113 (DYNLL1P3-001) 18513118-18513383 processed_pseudogene
CIL_0008CW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1702 VISTA 10090 4:139530774-140132378
GeneTranscriptPositionBiotype
ENSMUSG00000028736 (Pax7)
paired box 7 		ENSMUST00000030508 (Pax7-001) 139737062-139833528 protein_coding
ENSMUST00000174681 (Pax7-002) 139740676-139833007 protein_coding
ENSMUSG00000028737 (Aldh4a1)
aldehyde dehydrogenase 4 family, member A1 		ENSMUST00000039818 (Aldh4a1-001) 139622866-139649690 protein_coding
ENSMUST00000124987 (Aldh4a1-003) 139623109-139635591 processed_transcript
ENSMUST00000146309 (Aldh4a1-002) 139622894-139649687 processed_transcript
ENSMUSG00000040972 (Igsf21)
immunoglobulin superfamily, member 21 		ENSMUST00000039331 (Igsf21-001) 140026846-140246784 protein_coding
ENSMUSG00000041025 (Iffo2)
intermediate filament family orphan 2 		ENSMUST00000040023 (Iffo2-201) 139531689-139620379 protein_coding
ENSMUST00000123827 (Iffo2-001) 139530548-139617082 protein_coding
ENSMUST00000174078 (Iffo2-002) 139574720-139620382 protein_coding
ENSMUSG00000078234 (Klhdc7a)
kelch domain containing 7A 		ENSMUST00000105031 (Klhdc7a-001) 139960220-139968026 protein_coding
ENSMUSG00000085928 (4933427I22Rik)
RIKEN cDNA 4933427I22 gene 		ENSMUST00000138672 (4933427I22Rik-002) 139926683-139933074 lincRNA
ENSMUST00000153921 (4933427I22Rik-001) 139926111-139943519 lincRNA
ENSMUSG00000085968 (Gm13027)
predicted gene 13027 		ENSMUST00000135858 (Gm13027-001) 140131877-140133351 antisense
ENSMUSG00000087628 (Gm13028)
predicted gene 13028 		ENSMUST00000128563 (Gm13028-001) 139923349-139933170 lincRNA
ENSMUSG00000087646 (Gm1667)
predicted gene 1667 		ENSMUST00000151651 (Gm1667-001) 139910488-139912133 lincRNA
ENSMUSG00000094359 (Gm25571)
predicted gene, 25571 		ENSMUST00000178322 (Gm25571-201) 139588876-139588977 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CW_0001ENSG00000117154ENST00000251296ENST00000412684ENST00000473951ENST00000497331ENSG00000159423ENST00000290597ENST00000375341ENST00000432718ENST00000454547ENST00000538309ENST00000538839ENSG00000169991ENST00000355609ENST00000416166ENST00000455833ENSG00000179023ENST00000400664ENSG00000225387ENST00000420211ENSG00000235282ENST00000596113CIL_0008CW_0002ENSMUSG00000028736ENSMUST00000030508ENSMUST00000174681ENSMUSG00000028737ENSMUST00000039818ENSMUST00000124987ENSMUST00000146309ENSMUSG00000040972ENSMUST00000039331ENSMUSG00000041025ENSMUST00000040023ENSMUST00000123827ENSMUST00000174078ENSMUSG00000078234ENSMUST00000105031ENSMUSG00000085928ENSMUST00000138672ENSMUST00000153921ENSMUSG00000085968ENSMUST00000135858ENSMUSG00000087628ENSMUST00000128563ENSMUSG00000087646ENSMUST00000151651ENSMUSG00000094359ENSMUST00000178322
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CW_0001ENSG00000117154ENST00000251296ENST00000412684ENST00000473951ENST00000497331ENSG00000159423ENST00000290597ENST00000375341ENST00000538309ENST00000538839ENSG00000169991ENST00000355609ENST00000416166ENST00000455833ENSG00000179023ENST00000400664ENSG00000225387ENST00000420211ENSG00000235282ENST00000596113CIL_0008CW_0002ENSMUSG00000028736ENSMUST00000030508ENSMUST00000174681ENSMUSG00000028737ENSMUST00000039818ENSMUSG00000040972ENSMUST00000039331ENSMUSG00000041025ENSMUST00000040023ENSMUST00000123827ENSMUST00000174078ENSMUSG00000078234ENSMUST00000105031ENSMUSG00000085928ENSMUST00000138672ENSMUST00000153921ENSMUSG00000085968ENSMUST00000135858ENSMUSG00000087628ENSMUST00000128563ENSMUSG00000087646ENSMUST00000151651ENSMUSG00000094359ENSMUST00000178322
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000117154 ENST00000251296 1.470±0.00 N/A 0.304±0.00 7.344±4.84 0.634±0.00 N/A 0.438±0.40 3.498±0.00 0.786±0.00 1.495±0.00 N/A 0.448±0.14 1.178±0.81 0.312±0.03
ENST00000412684 N/A N/A N/A 4.748±0.00 0.879±0.00 N/A N/A N/A N/A 0.193±0.00 N/A 0.371±0.00 0.900±0.00 N/A
ENST00000473951 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.380±0.00 N/A N/A N/A N/A
ENST00000497331 N/A 0.253±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000159423 ENST00000290597 N/A N/A N/A 1.393±0.00 N/A N/A N/A 3.812±0.00 N/A N/A N/A N/A N/A N/A
ENST00000375341 2.935±0.00 1.593±0.00 8.164±0.00 8.868±0.00 12.739±0.00 N/A 4.374±0.00 21.065±13.10 33.821±31.81 N/A 6.183±2.56 6.015±1.81 10.962±3.08 1.549±0.73
ENST00000432718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538309 N/A N/A 3.253±0.00 N/A N/A N/A 0.354±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000538839 4.050±0.00 1.548±0.00 N/A 9.762±0.00 12.346±11.71 N/A 4.019±0.00 27.464±23.05 95.355±0.00 3.752±0.00 3.029±1.88 4.054±0.00 8.378±2.52 1.789±0.80
ENSG00000169991 ENST00000355609 N/A N/A N/A N/A N/A 4.277±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416166 N/A N/A N/A 1.929±0.00 N/A N/A N/A N/A 3.049±0.00 1.623±0.00 N/A 6.594±1.90 N/A 1.190±0.00
ENST00000455833 1.552±0.00 3.364±0.00 0.878±0.00 3.907±2.97 4.203±3.21 1.585±0.94 0.590±0.29 7.269±0.00 1.266±0.00 3.646±2.44 1.256±0.00 3.092±0.72 4.367±1.17 1.098±0.67
ENSG00000179023 ENST00000400664 0.015±0.00 0.016±0.00 3.160±0.00 0.052±0.04 0.416±0.37 0.069±0.03 0.011±0.01 5.931±5.12 0.309±0.01 0.134±0.01 0.096±0.09 0.395±0.35 0.018±0.01 0.385±0.17
ENSG00000225387 ENST00000420211 N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 0.088±0.00
ENSG00000235282 ENST00000596113 N/A 0.118±0.00 N/A 0.058±0.00 0.058±0.00 0.055±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028736 ENSMUST00000030508 N/A N/A 0.002±0.00 1.417±1.58 0.063±0.04 N/A N/A 0.007±0.00 0.009±0.01 0.021±0.01 0.439±0.14 N/A 0.006±0.00 0.007±0.01
ENSMUST00000174681 N/A N/A N/A 1.572±0.00 0.042±0.01 N/A 0.012±0.00 0.020±0.01 N/A 0.027±0.01 N/A N/A N/A N/A
ENSMUSG00000028737 ENSMUST00000039818 34.415±1.24 139.794±9.99 12.471±1.15 9.589±0.26 49.533±9.32 15.766±2.34 52.559±2.28 245.490±24.40 154.957±119.37 19.787±1.48 40.011±1.94 25.902±7.55 16.251±5.23 3.397±0.25
ENSMUST00000124987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040972 ENSMUST00000039331 0.257±0.01 0.335±0.19 0.262±0.10 11.606±4.50 0.092±0.03 0.524±0.14 0.222±0.11 0.099±0.04 0.025±0.01 0.091±0.03 0.059±0.03 0.158±0.07 0.036±0.02 0.181±0.03
ENSMUSG00000041025 ENSMUST00000040023 N/A N/A N/A N/A 3.874±0.00 3.075±0.00 N/A N/A N/A N/A N/A 6.154±0.00 N/A 0.657±0.00
ENSMUST00000123827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.879±15.93 N/A
ENSMUST00000174078 6.099±1.11 N/A 3.514±0.36 4.183±1.00 6.034±0.76 2.741±1.35 N/A N/A N/A 4.996±1.35 N/A 5.497±1.19 8.640±3.43 0.552±0.28
ENSMUSG00000078234 ENSMUST00000105031 26.041±11.28 12.882±3.58 6.769±4.22 0.954±1.05 23.529±8.90 3.502±0.82 1.460±0.73 20.646±3.49 1.986±1.62 4.417±0.38 0.157±0.14 5.849±1.62 0.240±0.18 0.359±0.31
ENSMUSG00000085928 ENSMUST00000138672 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.158±0.00 N/A N/A N/A 0.317±0.00
ENSMUST00000153921 0.034±0.02 N/A 0.006±0.00 0.062±0.02 0.060±0.03 N/A N/A N/A N/A 0.083±0.04 0.044±0.00 0.077±0.02 N/A 0.863±0.82
ENSMUSG00000085968 ENSMUST00000135858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.330±0.00
ENSMUSG00000087628 ENSMUST00000128563 N/A N/A N/A 0.364±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087646 ENSMUST00000151651 0.160±0.09 N/A 0.039±0.00 N/A 0.346±0.01 N/A 0.110±0.03 N/A N/A 1.411±0.40 0.129±0.00 0.359±0.00 N/A N/A
ENSMUSG00000094359 ENSMUST00000178322 N/A N/A N/A 2800.420±0.00 N/A N/A N/A N/A 283.861±0.00 N/A N/A N/A N/A N/A

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