C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin VIIA and Rab interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170011 MYRIP 9606 + 3:39808914-40260321 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302541 MYRIP-001 39809605-40260321 protein_coding
  ENST00000396217 MYRIP-201 39809660-40260313 protein_coding
  ENST00000425621 MYRIP-004 39809706-40258521 protein_coding
  ENST00000444716 MYRIP-002 39808914-40258166 protein_coding
  ENST00000458292 MYRIP-006 39809832-40258752 nonsense_mediated_decay
  ENST00000458441 MYRIP-005 39809832-40258752 nonsense_mediated_decay
  ENST00000459828 MYRIP-007 40071116-40259965 processed_transcript
  ENST00000475082 MYRIP-003 39810487-40162962 processed_transcript
  ENST00000482033 MYRIP-008 40100011-40167224 processed_transcript
  ENST00000539167 MYRIP-202 40100011-40260313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302541ENST00000396217ENST00000425621ENST00000444716ENST00000458292ENST00000458441ENST00000459828ENST00000539167
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302541 0.507±0.00 0.626±0.00 1.160±0.21 N/A 0.771±0.00 N/A 1.328±0.00 1.441±0.00 N/A N/A 0.349±0.07 N/A N/A
ENST00000396217 N/A 0.881±0.00 3.680±0.00 1.079±0.00 N/A 0.290±0.23 N/A N/A N/A N/A 0.160±0.00 N/A 0.671±0.53
ENST00000425621 N/A N/A N/A 0.500±0.00 N/A N/A N/A 0.182±0.00 N/A 0.362±0.00 N/A 0.028±0.00 N/A
ENST00000444716 0.642±0.00 N/A 1.644±0.00 1.674±0.00 N/A N/A N/A N/A 0.117±0.00 N/A 0.096±0.00 0.087±0.01 N/A
ENST00000458292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A
ENST00000458441 N/A N/A N/A N/A N/A N/A N/A 0.213±0.00 N/A N/A N/A N/A 0.455±0.00
ENST00000459828 0.345±0.00 0.603±0.00 4.430±0.00 0.286±0.00 0.416±0.00 0.156±0.02 N/A 0.457±0.00 0.090±0.00 0.182±0.00 0.186±0.09 0.057±0.03 0.618±0.49
ENST00000539167 N/A N/A 1.697±0.38 N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013U CIL_00013U_0001 CGP 3:39467198-40260321
CIL_0003YR CIL_0003YR_0001 CGP 3:39808914-40312424

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000145 IEA exocyst
GO:0001750 IEA photoreceptor outer segment
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0006886 IEA intracellular protein transport
GO:0008270 NAS zinc ion binding
GO:0015629 IEA actin cytoskeleton
GO:0017137 IEA Rab GTPase binding
GO:0031045 ISS dense core granule
GO:0032024 ISS positive regulation of insulin secretion
GO:0042470 IEA melanosome
GO:0045202 IEA synapse
GO:0048471 ISS perinuclear region of cytoplasm
GO:0051018 IEA protein kinase A binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038814 myrip myosin VIIA and Rab interacting protein protein_coding Danio_rerio
ENSDARG00000075706 MYRIP (2 of 2) myosin VIIA and Rab interacting protein protein_coding Danio_rerio
ENSMUSG00000041794 Myrip myosin VIIA and Rab interacting protein protein_coding Mus_musculus

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