C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin VIIA and Rab interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000302541 MYRIP-001 ENSG00000170011 9606 + 3:39809605-40260321 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverOvaryENST00000302541
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Ovary
ENST00000302541 0.507±0.00 0.626±0.00 1.160±0.21 0.771±0.00 1.328±0.00 1.441±0.00 0.349±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013U CIL_00013U_0001 CGP 3:39467198-40260321
CIL_0003YR CIL_0003YR_0001 CGP 3:39808914-40312424

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000145 IEA exocyst
GO:0001750 IEA photoreceptor outer segment
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0006886 IEA intracellular protein transport
GO:0008270 NAS zinc ion binding
GO:0015629 IEA actin cytoskeleton
GO:0017137 IEA Rab GTPase binding
GO:0031045 ISS dense core granule
GO:0032024 ISS positive regulation of insulin secretion
GO:0042470 IEA melanosome
GO:0045202 IEA synapse
GO:0048471 ISS perinuclear region of cytoplasm
GO:0051018 IEA protein kinase A binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048121 Myrip-001 protein_coding Mus_musculus 0 2366
ENSMUST00000133173 Myrip-002 protein_coding Mus_musculus 0 725
ENSDART00000113420 myrip-202 protein_coding Danio_rerio 0 228
ENSDART00000082301 myrip-201 protein_coding Danio_rerio 0 228
ENSDART00000137257 myrip-001 protein_coding Danio_rerio 0 228

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