C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin VIIA and Rab interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041794 Myrip 10090 + 9:120303936-120474841 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048121 Myrip-001 120303936-120474841 protein_coding
  ENSMUST00000129168 Myrip-004 120427406-120432483 processed_transcript
  ENSMUST00000133173 Myrip-002 120386309-120424657 protein_coding
  ENSMUST00000139665 Myrip-003 120409883-120417204 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048121ENSMUST00000129168ENSMUST00000133173
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048121 1.573±0.52 0.990±0.14 1.281±0.34 3.287±2.20 0.748±0.22 2.582±0.40 0.625±0.17 0.290±0.17 0.032±0.02 3.840±1.70 0.243±0.05 1.671±0.79 0.158±0.08 0.093±0.08
ENSMUST00000129168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.253±0.00 N/A N/A
ENSMUST00000133173 N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A 0.241±0.00 1.326±0.00 N/A 0.163±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013U CIL_00013U_0002 CGP 9:120149742-120474841
CIL_0003YR CIL_0003YR_0002 CGP 9:120303936-120495327

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000145 IDA exocyst
GO:0001750 IDA photoreceptor outer segment
GO:0003779 IDA actin binding
GO:0005515 IPI protein binding
GO:0006886 IEA intracellular protein transport
GO:0015629 IDA actin cytoskeleton
GO:0017022 ISO myosin binding
GO:0017137 ISO Rab GTPase binding
GO:0030050 TAS vesicle transport along actin filament
GO:0031045 ISS dense core granule
GO:0032024 ISS positive regulation of insulin secretion
GO:0042470 IDA melanosome
GO:0045202 IDA synapse
GO:0046872 IEA metal ion binding
GO:0048471 ISS perinuclear region of cytoplasm
GO:0051018 IPI protein kinase A binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038814 myrip myosin VIIA and Rab interacting protein protein_coding Danio_rerio
ENSDARG00000075706 MYRIP (2 of 2) myosin VIIA and Rab interacting protein protein_coding Danio_rerio
ENSG00000170011 MYRIP myosin VIIA and Rab interacting protein protein_coding Homo_sapiens

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