C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homeobox D12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170178 HOXD12 9606 + 2:176099730-176101193 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000404162 HOXD12-002 176099802-176100760 protein_coding
  ENST00000406506 HOXD12-001 176099730-176101193 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENST00000404162ENST00000406506
Transcript ID Ovary Placenta
ENST00000404162 0.230±0.00 0.094±0.00
ENST00000406506 0.184±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_00090A CIL_00090A_0001 VISTA 2:175589301-176190657
CIL_0008JZ CIL_0008JZ_0001 VISTA 2:175775342-176376682
CIL_0001HG CIL_0001HG_0001 CGP 2:176092891-176101193
CIL_0001HF CIL_0001HF_0001 CGP 2:176099730-176109754

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001501 IEA skeletal system development
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007389 IEA pattern specification process
GO:0042733 IEA embryonic digit morphogenesis
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059263 hoxd12a homeo box D12a protein_coding Danio_rerio
ENSMUSG00000001823 Hoxd12 homeobox D12 protein_coding Mus_musculus

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