C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001HG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128714-ENSG00000170178 CGP 9606 2:176092891-176101193
GeneTranscriptPositionBiotype
ENSG00000128714 (HOXD13)
homeobox D13 		ENST00000392539 (HOXD13-001) 176092891-176095938 protein_coding
ENSG00000170178 (HOXD12)
homeobox D12 		ENST00000404162 (HOXD12-002) 176099802-176100760 protein_coding
ENST00000406506 (HOXD12-001) 176099730-176101193 protein_coding

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0001HG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001819-ENSMUSG00000001823 CGP 10090 2:74668310-74677705
GeneTranscriptPositionBiotype
ENSMUSG00000001819 (Hoxd13)
homeobox D13 		ENSMUST00000001872 (Hoxd13-001) 74668310-74671599 protein_coding
ENSMUSG00000001823 (Hoxd12)
homeobox D12 		ENSMUST00000001878 (Hoxd12-001) 74675013-74677705 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisCIL_0001HG_0001ENSG00000128714ENST00000392539ENSG00000170178ENST00000404162ENST00000406506CIL_0001HG_0002ENSMUSG00000001819ENSMUST00000001872ENSMUSG00000001823ENSMUST00000001878
Region; Gene Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisCIL_0001HG_0001ENSG00000128714ENST00000392539ENSG00000170178ENST00000404162ENST00000406506CIL_0001HG_0002ENSMUSG00000001819ENSMUST00000001872ENSMUSG00000001823ENSMUST00000001878
Gene Transcript Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSG00000128714 ENST00000392539 0.013±0.00 N/A N/A 0.006±0.00 0.466±0.40 0.136±0.00 0.677±0.00 N/A 0.067±0.08 0.039±0.02 0.225±0.04
ENSG00000170178 ENST00000404162 N/A N/A N/A N/A N/A N/A N/A N/A 0.230±0.00 0.094±0.00 N/A
ENST00000406506 N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A
Gene Transcript Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUSG00000001819 ENSMUST00000001872 0.021±0.00 8.281±0.05 0.112±0.00 N/A 16.639±7.13 N/A 0.204±0.09 0.065±0.04 0.058±0.04 0.207±0.16 0.047±0.03
ENSMUSG00000001823 ENSMUST00000001878 0.015±0.00 1.259±0.15 0.012±0.01 N/A 0.941±0.50 0.023±0.00 0.063±0.05 N/A N/A 0.109±0.07 0.025±0.00

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