C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: homeobox D12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406506 HOXD12-001 ENSG00000170178 9606 + 2:176099730-176101193 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000406506
Transcript ID Ovary
ENST00000406506 0.184±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_00090A CIL_00090A_0001 VISTA 2:175589301-176190657
CIL_0008JZ CIL_0008JZ_0001 VISTA 2:175775342-176376682
CIL_0001HG CIL_0001HG_0001 CGP 2:176092891-176101193
CIL_0001HF CIL_0001HF_0001 CGP 2:176099730-176109754

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IEA skeletal system development
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007389 IEA pattern specification process
GO:0042733 IEA embryonic digit morphogenesis
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001878 Hoxd12-001 protein_coding Mus_musculus 0 963

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