C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 78
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170423 KRT78 9606 - 12:52837804-52849092 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304620 KRT78-001 52838962-52848994 protein_coding
  ENST00000359499 KRT78-002 52837804-52848283 protein_coding
  ENST00000547110 KRT78-003 52844604-52849092 protein_coding
  ENST00000547920 KRT78-005 52838966-52839814 protein_coding
  ENST00000551581 KRT78-004 52845996-52847953 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainKidneyLungOvaryPlacentaTestisENST00000304620ENST00000359499ENST00000547110ENST00000547920ENST00000551581
Transcript ID Adipose Adrenal Brain Kidney Lung Ovary Placenta Testis
ENST00000304620 0.109±0.00 0.014±0.00 N/A N/A N/A 7.158±5.41 0.290±0.06 0.339±0.20
ENST00000359499 N/A N/A N/A 0.048±0.00 N/A 2.220±0.00 N/A N/A
ENST00000547110 N/A N/A N/A 0.104±0.00 0.047±0.00 1.815±0.00 N/A 0.377±0.00
ENST00000547920 0.104±0.00 N/A N/A N/A N/A N/A N/A 0.319±0.00
ENST00000551581 0.249±0.00 N/A 0.078±0.00 N/A N/A N/A N/A 0.182±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TA CIL_0006TA_0001 CGP 12:52821410-52849092
CIL_00038V CIL_00038V_0001 CGP 12:52837804-52949954

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005615 IDA extracellular space
GO:0005882 IEA intermediate filament
GO:0045095 IEA keratin filament
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034836 KRT80 keratin 80 protein_coding Danio_rerio
ENSMUSG00000050463 Krt78 keratin 78 protein_coding Mus_musculus

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