C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: keratin 78
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547110 KRT78-003 ENSG00000170423 9606 - 12:52844604-52849092 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLungOvaryTestisENST00000547110
Transcript ID Kidney Lung Ovary Testis
ENST00000547110 0.104±0.00 0.047±0.00 1.815±0.00 0.377±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TA CIL_0006TA_0001 CGP 12:52821410-52849092
CIL_00038V CIL_00038V_0001 CGP 12:52837804-52949954

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 191
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 8.00001e-42 174
ENSMUST00000042957 Krt75-001 protein_coding Mus_musculus 4e-30 135
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 4e-30 135
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 4e-30 135
ENSMUST00000062879 Gm5414-201 protein_coding Mus_musculus 2e-28 130
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 8e-27 124
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 8e-27 124

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