C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 78
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304620 KRT78-001 ENSG00000170423 9606 - 12:52838962-52848994 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalOvaryPlacentaTestisENST00000304620
Transcript ID Adipose Adrenal Ovary Placenta Testis
ENST00000304620 0.109±0.00 0.014±0.00 7.158±5.41 0.290±0.06 0.339±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TA CIL_0006TA_0001 CGP 12:52821410-52849092
CIL_00038V CIL_00038V_0001 CGP 12:52837804-52949954

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005615 IDA extracellular space
GO:0005882 IEA intermediate filament
GO:0045095 IEA keratin filament
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164932 Krt78-201 protein_coding Mus_musculus 0 987
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 390
ENSMUST00000023797 Krt4-201 protein_coding Mus_musculus 0 346
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 0 329
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 298
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 292
ENSMUST00000042957 Krt75-001 protein_coding Mus_musculus 0 263
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 9.80909e-45 185
ENSMUST00000062879 Gm5414-201 protein_coding Mus_musculus 7e-32 143
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 1e-28 132

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