C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 98, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171262 FAM98B 9606 + 15:38454127-38487710 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305752 FAM98B-003 38464149-38470662 retained_intron
  ENST00000397609 FAM98B-001 38454127-38487710 protein_coding
  ENST00000491535 FAM98B-002 38454154-38483665 protein_coding
  ENST00000559431 FAM98B-004 38465346-38484638 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397609ENST00000491535
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397609 5.242±0.00 5.667±0.00 0.910±0.00 4.531±3.57 3.284±2.04 3.957±2.27 2.686±1.96 3.062±2.85 1.337±0.28 2.045±0.73 1.160±0.93 4.516±2.02 5.768±0.65 5.804±1.57
ENST00000491535 N/A N/A 0.350±0.00 0.530±0.00 0.587±0.00 0.897±0.00 N/A 0.175±0.00 0.571±0.00 0.843±0.00 N/A 0.421±0.00 N/A 0.971±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QP CIL_0006QP_0001 CGP 15:38252326-38487710
CIL_0002RQ CIL_0002RQ_0001 CGP 15:38454127-38565575

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0044822 IDA poly(A) RNA binding
GO:0072669 IDA tRNA-splicing ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060068 fam98b family with sequence similarity 98, member B protein_coding Danio_rerio
ENSMUSG00000027349 Fam98b family with sequence similarity 98, member B protein_coding Mus_musculus

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