C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002RQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171262-ENSG00000172575 CGP 9606 15:38454127-38565575
GeneTranscriptPositionBiotype
ENSG00000172575 (RASGRP1)
RAS guanyl releasing protein 1 (calcium and DAG-regulated) 		ENST00000310803 (RASGRP1-001) 38488103-38564806 protein_coding
ENST00000414708 (RASGRP1-004) 38490554-38564635 nonsense_mediated_decay
ENST00000450598 (RASGRP1-005) 38490554-38564635 protein_coding
ENST00000539159 (RASGRP1-201) 38488105-38564806 protein_coding
ENST00000557875 (RASGRP1-012) 38494452-38501190 nonsense_mediated_decay
ENST00000558164 (RASGRP1-006) 38490554-38564635 protein_coding
ENST00000558418 (RASGRP1-010) 38518381-38560279 protein_coding
ENST00000558432 (RASGRP1-007) 38490095-38560082 protein_coding
ENST00000559830 (RASGRP1-003) 38490554-38564635 protein_coding
ENST00000560425 (RASGRP1-011) 38498916-38511705 nonsense_mediated_decay
ENST00000560929 (RASGRP1-009) 38526384-38565169 protein_coding
ENST00000561117 (RASGRP1-008) 38526309-38565239 protein_coding
ENST00000561180 (RASGRP1-002) 38490480-38565575 protein_coding
ENSG00000259192 (AC109631.1)
 ENST00000559695 (AC109631.1-001) 38458760-38459540 processed_pseudogene
ENSG00000259326 (RP11-102L12.2)
 ENST00000560231 (RP11-102L12.2-001) 38502853-38504981 antisense
ENSG00000259598 (RP11-275I4.1)
 ENST00000559544 (RP11-275I4.1-001) 38524070-38534655 antisense
CIL_0002RQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027349-ENSMUSG00000027347 CGP 10090 2:117249739-117343001
GeneTranscriptPositionBiotype
ENSMUSG00000027347 (Rasgrp1)
RAS guanyl releasing protein 1 		ENSMUST00000102534 (Rasgrp1-001) 117279993-117343001 protein_coding
ENSMUST00000110898 (Rasgrp1-002) 117298093-117342925 retained_intron
ENSMUST00000172901 (Rasgrp1-004) 117282542-117342709 protein_coding
ENSMUST00000173252 (Rasgrp1-006) 117282542-117342709 protein_coding
ENSMUST00000173541 (Rasgrp1-005) 117282542-117342709 protein_coding
ENSMUST00000174770 (Rasgrp1-003) 117282542-117342709 nonsense_mediated_decay
ENSMUST00000178884 (Rasgrp1-201) 117279994-117342877 protein_coding
ENSMUSG00000027349 (Fam98b)
family with sequence similarity 98, member B 		ENSMUST00000028825 (Fam98b-001) 117249739-117271540 protein_coding
ENSMUST00000140936 (Fam98b-002) 117249739-117260243 retained_intron
ENSMUST00000143612 (Fam98b-003) 117258782-117260241 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RQ_0001ENSG00000172575ENST00000310803ENST00000414708ENST00000450598ENST00000539159ENST00000557875ENST00000558164ENST00000558418ENST00000558432ENST00000559830ENST00000560425ENST00000560929ENST00000561117ENST00000561180ENSG00000259192ENST00000559695ENSG00000259326ENST00000560231ENSG00000259598ENST00000559544CIL_0002RQ_0002ENSMUSG00000027347ENSMUST00000102534ENSMUST00000110898ENSMUST00000172901ENSMUST00000173252ENSMUST00000173541ENSMUST00000174770ENSMUST00000178884ENSMUSG00000027349ENSMUST00000028825ENSMUST00000140936ENSMUST00000143612
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RQ_0001ENSG00000172575ENST00000310803ENST00000450598ENST00000539159ENST00000557875ENST00000558164ENST00000558418ENST00000558432ENST00000559830ENST00000560425ENST00000561180ENSG00000259192ENST00000559695ENSG00000259326ENST00000560231ENSG00000259598ENST00000559544CIL_0002RQ_0002ENSMUSG00000027347ENSMUST00000102534ENSMUST00000110898ENSMUST00000172901ENSMUST00000173541ENSMUST00000174770ENSMUST00000178884ENSMUSG00000027349ENSMUST00000028825
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172575 ENST00000310803 N/A 0.754±0.00 N/A 1.464±0.00 1.330±0.00 0.035±0.00 N/A 1.787±0.00 0.033±0.00 0.269±0.00 N/A 0.108±0.07 0.352±0.23 0.535±0.00
ENST00000414708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450598 N/A N/A N/A 3.352±0.00 N/A N/A N/A N/A N/A 1.147±0.00 N/A N/A N/A 1.226±0.00
ENST00000539159 N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A N/A 0.063±0.00 0.182±0.00 N/A
ENST00000557875 N/A N/A N/A N/A N/A N/A N/A 0.821±0.00 N/A N/A N/A N/A N/A N/A
ENST00000558164 N/A N/A N/A N/A N/A 0.712±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558418 N/A N/A N/A N/A N/A N/A N/A N/A 0.104±0.00 N/A N/A N/A N/A N/A
ENST00000558432 N/A N/A 0.868±0.00 2.533±0.00 N/A N/A N/A N/A 0.409±0.00 N/A N/A 0.154±0.00 N/A N/A
ENST00000559830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.260±0.00 N/A N/A
ENST00000560425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.603±0.00 N/A N/A N/A
ENST00000560929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561180 N/A N/A 0.901±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A
ENSG00000259192 ENST00000559695 N/A 0.140±0.00 N/A 0.255±0.20 0.065±0.00 0.156±0.00 N/A N/A N/A 0.482±0.00 N/A 0.053±0.00 N/A 0.156±0.00
ENSG00000259326 ENST00000560231 0.032±0.00 N/A N/A N/A 0.055±0.00 0.442±0.41 0.257±0.00 N/A 0.824±0.00 1.908±0.00 0.686±0.00 0.241±0.14 N/A N/A
ENSG00000259598 ENST00000559544 N/A 0.026±0.00 N/A 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027347 ENSMUST00000102534 0.086±0.03 0.085±0.01 0.075±0.00 0.176±0.00 1.401±0.11 0.224±0.00 N/A 0.309±0.21 0.196±0.00 0.345±0.00 0.002±0.00 0.787±0.45 0.067±0.00 N/A
ENSMUST00000110898 N/A 0.760±0.33 N/A N/A 4.750±1.36 0.379±0.02 N/A N/A 0.276±0.00 N/A N/A 0.845±0.38 N/A N/A
ENSMUST00000172901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.625±0.03 N/A N/A
ENSMUST00000173252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173541 N/A 0.064±0.00 N/A 33.297±0.00 N/A N/A N/A N/A N/A N/A N/A 0.606±0.16 N/A 0.125±0.03
ENSMUST00000174770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 0.349±0.00 N/A 0.030±0.02
ENSMUST00000178884 0.553±0.29 0.138±0.06 0.366±0.00 13.657±17.94 7.400±1.65 0.361±0.09 0.247±0.07 1.206±0.25 0.328±0.14 1.644±0.45 0.139±0.22 1.123±1.18 1.161±1.01 0.048±0.02
ENSMUSG00000027349 ENSMUST00000028825 4.675±1.64 5.869±0.93 7.450±1.09 20.471±4.44 2.550±0.79 3.509±0.75 4.056±1.30 5.115±1.02 6.501±4.25 4.319±0.51 8.863±0.31 8.376±7.35 10.750±5.76 6.999±0.73
ENSMUST00000140936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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