C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 98, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397609 FAM98B-001 ENSG00000171262 9606 + 15:38454127-38487710 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397609
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397609 5.242±0.00 5.667±0.00 0.910±0.00 4.531±3.57 3.284±2.04 3.957±2.27 2.686±1.96 3.062±2.85 1.337±0.28 2.045±0.73 1.160±0.93 4.516±2.02 5.768±0.65 5.804±1.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QP CIL_0006QP_0001 CGP 15:38252326-38487710
CIL_0002RQ CIL_0002RQ_0001 CGP 15:38454127-38565575

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0044822 IDA poly(A) RNA binding
GO:0072669 IDA tRNA-splicing ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028825 Fam98b-001 protein_coding Mus_musculus 0 1306
ENSMUST00000140936 Fam98b-002 retained_intron Mus_musculus 0 246
ENSMUST00000143612 Fam98b-003 processed_transcript Mus_musculus 0 243

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