C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006QP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166068-ENSG00000171262 CGP 9606 15:38252326-38487710
GeneTranscriptPositionBiotype
ENSG00000166068 (SPRED1)
sprouty-related, EVH1 domain containing 1
ENST00000299084 (SPRED1-001) 38252326-38357249 protein_coding
ENST00000561205 (SPRED1-004) 38252848-38326363 processed_transcript
ENST00000561317 (SPRED1-003) 38253181-38339771 protein_coding
ENSG00000259192 (AC109631.1)
ENST00000559695 (AC109631.1-001) 38458760-38459540 processed_pseudogene
CIL_0006QP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027351-ENSMUSG00000027349 CGP 10090 2:117121374-117271540
GeneTranscriptPositionBiotype
ENSMUSG00000027349 (Fam98b)
family with sequence similarity 98, member B
ENSMUST00000028825 (Fam98b-001) 117249739-117271540 protein_coding
ENSMUST00000140936 (Fam98b-002) 117249739-117260243 retained_intron
ENSMUST00000143612 (Fam98b-003) 117258782-117260241 processed_transcript
ENSMUSG00000027351 (Spred1)
sprouty protein with EVH-1 domain 1, related sequence
ENSMUST00000028829 (Spred1-001) 117121374-117182279 protein_coding
ENSMUST00000110901 (Spred1-002) 117121638-117172854 protein_coding
ENSMUSG00000076376 (Mir674)
microRNA 674
ENSMUST00000102421 (Mir674-201) 117185127-117185226 miRNA
ENSMUSG00000081842 (Rap1a-ps2)
RAS related protein-1a, pseudogene 2
ENSMUST00000118467 (Rap1a-ps2-001) 117240883-117241441 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QP_0001ENSG00000166068ENST00000299084ENST00000561205ENST00000561317ENSG00000259192ENST00000559695CIL_0006QP_0002ENSMUSG00000027349ENSMUST00000028825ENSMUST00000140936ENSMUST00000143612ENSMUSG00000027351ENSMUST00000028829ENSMUST00000110901ENSMUSG00000076376ENSMUST00000102421ENSMUSG00000081842ENSMUST00000118467
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QP_0001ENSG00000166068ENST00000299084ENST00000561205ENSG00000259192ENST00000559695CIL_0006QP_0002ENSMUSG00000027349ENSMUST00000028825ENSMUSG00000027351ENSMUST00000028829ENSMUST00000110901ENSMUSG00000076376ENSMUST00000102421ENSMUSG00000081842ENSMUST00000118467
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166068 ENST00000299084 6.560±0.00 4.776±0.00 1.192±0.00 6.966±0.01 4.709±0.86 3.233±0.68 1.658±0.89 1.845±1.62 2.491±1.77 5.207±2.85 0.285±0.00 3.428±0.49 2.888±0.50 2.796±1.36
ENST00000561205 N/A N/A 2.049±0.00 N/A N/A 5.258±0.00 1.454±0.00 N/A N/A 5.332±0.00 1.317±0.00 N/A N/A N/A
ENST00000561317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259192 ENST00000559695 N/A 0.140±0.00 N/A 0.255±0.20 0.065±0.00 0.156±0.00 N/A N/A N/A 0.482±0.00 N/A 0.053±0.00 N/A 0.156±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027349 ENSMUST00000028825 4.675±1.64 5.869±0.93 7.450±1.09 20.471±4.44 2.550±0.79 3.509±0.75 4.056±1.30 5.115±1.02 6.501±4.25 4.319±0.51 8.863±0.31 8.376±7.35 10.750±5.76 6.999±0.73
ENSMUST00000140936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027351 ENSMUST00000028829 4.760±1.83 22.299±8.93 6.337±0.28 7.838±1.72 4.780±1.75 5.593±2.93 2.568±0.30 3.707±0.67 2.373±0.44 8.757±1.22 1.055±0.13 13.418±7.74 1.804±0.92 0.606±0.17
ENSMUST00000110901 N/A N/A N/A 8.268±0.00 N/A N/A N/A N/A N/A N/A N/A 5.358±0.00 N/A 0.318±0.00
ENSMUSG00000076376 ENSMUST00000102421 N/A N/A N/A N/A N/A N/A N/A N/A 3105.170±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000081842 ENSMUST00000118467 N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A

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