C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbohydrate (chondroitin 4) sulfotransferase 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171310 CHST11 9606 + 12:104455295-104762014 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303694 CHST11-001 104456973-104762014 protein_coding
  ENST00000546689 CHST11-006 104457001-104602147 protein_coding
  ENST00000547956 CHST11-007 104456968-104602279 protein_coding
  ENST00000549016 CHST11-005 104588848-104757339 protein_coding
  ENST00000549260 CHST11-002 104456971-104762014 protein_coding
  ENST00000550711 CHST11-004 104455295-104456996 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303694ENST00000546689ENST00000549016ENST00000549260
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303694 1.974±0.00 1.866±0.00 N/A 1.674±0.39 N/A 1.048±0.00 N/A N/A 1.082±0.00 3.478±0.60 N/A 1.277±0.50 2.942±1.04 N/A
ENST00000546689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.890±0.00 N/A N/A N/A
ENST00000549016 N/A N/A N/A N/A 3.892±0.00 N/A N/A 1.220±0.00 N/A N/A 0.673±0.00 3.091±0.00 16.303±0.00 N/A
ENST00000549260 0.649±0.00 3.080±0.00 0.534±0.00 2.603±1.88 1.342±0.09 1.421±0.28 0.609±0.41 1.229±0.68 0.949±0.00 1.805±1.26 0.233±0.00 0.926±0.42 4.573±0.64 3.928±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TA CIL_0002TA_0001 CGP 12:104455295-104958744

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001537 IDA N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0002063 IEA chondrocyte development
GO:0005975 TAS carbohydrate metabolic process
GO:0007585 IEA respiratory gaseous exchange
GO:0008146 IEA sulfotransferase activity
GO:0009791 IEA post-embryonic development
GO:0016020 IDA membrane
GO:0016021 IEA:NAS integral component of membrane
GO:0016051 IEA carbohydrate biosynthetic process
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0030206 IDA chondroitin sulfate biosynthetic process
GO:0030326 IEA embryonic limb morphogenesis
GO:0030512 IEA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0033037 IEA polysaccharide localization
GO:0036342 IEA post-anal tail morphogenesis
GO:0042127 IEA regulation of cell proliferation
GO:0042733 IEA embryonic digit morphogenesis
GO:0043066 IEA negative regulation of apoptotic process
GO:0044281 TAS small molecule metabolic process
GO:0047756 IDA chondroitin 4-sulfotransferase activity
GO:0048589 IEA developmental growth
GO:0048703 IEA embryonic viscerocranium morphogenesis
GO:0048704 IEA embryonic skeletal system morphogenesis
GO:0050659 IEA N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity
GO:0051216 IEA cartilage development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034375 chst11 carbohydrate (chondroitin 4) sulfotransferase 11 protein_coding Danio_rerio
ENSMUSG00000034612 Chst11 carbohydrate sulfotransferase 11 protein_coding Mus_musculus

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