C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002TA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171310-ENSG00000136052 CGP 9606 12:104455295-104958744
GeneTranscriptPositionBiotype
ENSG00000136052 (SLC41A2)
solute carrier family 41 (magnesium transporter), member 2 		ENST00000258538 (SLC41A2-001) 104802553-104928655 protein_coding
ENST00000411411 (SLC41A2-009) 104928162-104951528 protein_coding
ENST00000415674 (SLC41A2-008) 104928097-104958293 protein_coding
ENST00000417469 (SLC41A2-004) 104928390-104958698 protein_coding
ENST00000424946 (SLC41A2-007) 104928311-104958293 protein_coding
ENST00000432951 (SLC41A2-006) 104928492-104958288 protein_coding
ENST00000433540 (SLC41A2-005) 104928300-104958319 protein_coding
ENST00000437220 (SLC41A2-002) 104889033-104928202 protein_coding
ENST00000449866 (SLC41A2-003) 104928244-104958744 protein_coding
ENST00000549713 (SLC41A2-010) 104804975-104834179 processed_transcript
ENSG00000171310 (CHST11)
carbohydrate (chondroitin 4) sulfotransferase 11 		ENST00000303694 (CHST11-001) 104456973-104762014 protein_coding
ENST00000546689 (CHST11-006) 104457001-104602147 protein_coding
ENST00000547956 (CHST11-007) 104456968-104602279 protein_coding
ENST00000549016 (CHST11-005) 104588848-104757339 protein_coding
ENST00000549260 (CHST11-002) 104456971-104762014 protein_coding
ENST00000550711 (CHST11-004) 104455295-104456996 processed_transcript
ENSG00000258111 (RP11-43D4.2)
 ENST00000548397 (RP11-43D4.2-001) 104514029-104514439 processed_pseudogene
ENSG00000279176 (RP11-43D4.3)
 ENST00000623545 (RP11-43D4.3-001) 104552073-104553447 TEC
CIL_0002TA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034612-ENSMUSG00000034591 CGP 10090 10:82985498-83337882
GeneTranscriptPositionBiotype
ENSMUSG00000034591 (Slc41a2)
solute carrier family 41, member 2 		ENSMUST00000039956 (Slc41a2-001) 83230848-83337882 protein_coding
ENSMUST00000126617 (Slc41a2-002) 83316342-83337440 protein_coding
ENSMUST00000139329 (Slc41a2-005) 83301016-83304375 processed_transcript
ENSMUST00000154730 (Slc41a2-003) 83316572-83335402 protein_coding
ENSMUST00000154926 (Slc41a2-004) 83316215-83322883 protein_coding
ENSMUSG00000034612 (Chst11)
carbohydrate sulfotransferase 11 		ENSMUST00000040110 (Chst11-001) 82985498-83195900 protein_coding
ENSMUSG00000090200 (1700025N21Rik)
RIKEN cDNA 1700025N21 gene 		ENSMUST00000160997 (1700025N21Rik-001) 83139150-83142038 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TA_0001ENSG00000136052ENST00000258538ENST00000411411ENST00000415674ENST00000417469ENST00000424946ENST00000432951ENST00000433540ENST00000437220ENST00000449866ENST00000549713ENSG00000171310ENST00000303694ENST00000546689ENST00000547956ENST00000549016ENST00000549260ENST00000550711ENSG00000258111ENST00000548397ENSG00000279176ENST00000623545CIL_0002TA_0002ENSMUSG00000034591ENSMUST00000039956ENSMUST00000126617ENSMUST00000139329ENSMUST00000154730ENSMUST00000154926ENSMUSG00000034612ENSMUST00000040110ENSMUSG00000090200ENSMUST00000160997
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TA_0001ENSG00000136052ENST00000258538ENST00000411411ENSG00000171310ENST00000303694ENST00000546689ENST00000549016ENST00000549260ENSG00000258111ENST00000548397ENSG00000279176ENST00000623545CIL_0002TA_0002ENSMUSG00000034591ENSMUST00000039956ENSMUST00000154926ENSMUSG00000034612ENSMUST00000040110ENSMUSG00000090200ENSMUST00000160997
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136052 ENST00000258538 2.456±0.00 N/A N/A 1.746±1.08 2.055±1.05 1.387±0.00 0.313±0.04 9.501±8.18 3.715±1.03 1.219±0.70 0.177±0.00 0.842±0.23 1.096±0.76 1.685±0.45
ENST00000411411 N/A N/A 2.322±0.00 15.058±0.00 9.006±0.00 17.555±0.00 1.326±0.00 52.669±0.00 13.067±0.00 8.125±0.00 0.482±0.00 10.892±0.00 N/A N/A
ENST00000415674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171310 ENST00000303694 1.974±0.00 1.866±0.00 N/A 1.674±0.39 N/A 1.048±0.00 N/A N/A 1.082±0.00 3.478±0.60 N/A 1.277±0.50 2.942±1.04 N/A
ENST00000546689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.890±0.00 N/A N/A N/A
ENST00000547956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549016 N/A N/A N/A N/A 3.892±0.00 N/A N/A 1.220±0.00 N/A N/A 0.673±0.00 3.091±0.00 16.303±0.00 N/A
ENST00000549260 0.649±0.00 3.080±0.00 0.534±0.00 2.603±1.88 1.342±0.09 1.421±0.28 0.609±0.41 1.229±0.68 0.949±0.00 1.805±1.26 0.233±0.00 0.926±0.42 4.573±0.64 3.928±0.00
ENST00000550711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258111 ENST00000548397 N/A 0.338±0.00 N/A N/A 0.051±0.00 0.046±0.00 N/A 1.748±1.45 N/A N/A N/A N/A N/A N/A
ENSG00000279176 ENST00000623545 0.162±0.00 0.521±0.00 0.417±0.00 0.284±0.00 0.236±0.02 0.163±0.00 0.124±0.04 0.195±0.00 0.206±0.11 0.188±0.13 N/A 0.074±0.01 0.074±0.00 0.114±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034591 ENSMUST00000039956 0.923±0.23 0.793±0.13 1.130±0.46 0.894±0.28 0.849±0.00 3.208±0.77 0.233±0.00 1.357±0.46 0.058±0.03 1.329±0.17 0.073±0.01 1.746±0.89 1.218±0.86 2.552±1.07
ENSMUST00000126617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154926 N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A 3.080±0.00
ENSMUSG00000034612 ENSMUST00000040110 9.695±5.59 26.851±8.21 2.859±0.69 5.789±2.45 9.314±3.40 3.914±0.89 2.151±0.10 3.308±1.28 1.593±2.07 8.061±1.49 0.446±0.11 67.742±38.15 5.612±2.80 0.220±0.25
ENSMUSG00000090200 ENSMUST00000160997 0.241±0.19 N/A 0.036±0.02 0.056±0.00 0.176±0.00 N/A N/A 0.113±0.09 0.052±0.04 0.067±0.01 N/A 0.387±0.29 0.067±0.00 2.071±1.25

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