C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: carbohydrate (chondroitin 4) sulfotransferase 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000303694 CHST11-001 ENSG00000171310 9606 + 12:104456973-104762014 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonLiverLungOvaryPlacentaENST00000303694
Transcript ID Adipose Adrenal Brain Colon Liver Lung Ovary Placenta
ENST00000303694 1.974±0.00 1.866±0.00 1.674±0.39 1.048±0.00 1.082±0.00 3.478±0.60 1.277±0.50 2.942±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TA CIL_0002TA_0001 CGP 12:104455295-104958744

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001537 IDA N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0002063 IEA chondrocyte development
GO:0005975 TAS carbohydrate metabolic process
GO:0007585 IEA respiratory gaseous exchange
GO:0008146 IEA sulfotransferase activity
GO:0009791 IEA post-embryonic development
GO:0016020 IDA membrane
GO:0016021 IEA:NAS integral component of membrane
GO:0016051 IEA carbohydrate biosynthetic process
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0030206 IDA chondroitin sulfate biosynthetic process
GO:0030326 IEA embryonic limb morphogenesis
GO:0030512 IEA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0033037 IEA polysaccharide localization
GO:0036342 IEA post-anal tail morphogenesis
GO:0042127 IEA regulation of cell proliferation
GO:0042733 IEA embryonic digit morphogenesis
GO:0043066 IEA negative regulation of apoptotic process
GO:0044281 TAS small molecule metabolic process
GO:0047756 IDA chondroitin 4-sulfotransferase activity
GO:0048589 IEA developmental growth
GO:0048703 IEA embryonic viscerocranium morphogenesis
GO:0048704 IEA embryonic skeletal system morphogenesis
GO:0050659 IEA N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity
GO:0051216 IEA cartilage development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040110 Chst11-001 protein_coding Mus_musculus 0 1836
ENSDART00000042963 chst11-001 protein_coding Danio_rerio 0 545
ENSMUST00000043050 Chst12-001 protein_coding Mus_musculus 1e-18 100

Loading