C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171403 KRT9 9606 - 17:41565841-41572058 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000246662 KRT9-001 41565841-41572058 protein_coding
  ENST00000588431 KRT9-002 41566104-41572053 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLungOvaryPlacentaTestisENST00000246662ENST00000588431
Transcript ID Breast Heart Lung Ovary Placenta Testis
ENST00000246662 0.026±0.00 N/A N/A 0.080±0.01 0.168±0.00 N/A
ENST00000588431 N/A 0.028±0.00 0.075±0.00 0.087±0.00 0.054±0.01 0.121±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TN CIL_0000TN_0004 CGP 17:41523617-41572058
CIL_0000TM CIL_0000TM_0004 CGP 17:41565841-41586921

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005882 IEA intermediate filament
GO:0007283 IEA spermatogenesis
GO:0008544 TAS epidermis development
GO:0016020 IDA membrane
GO:0043588 IDA skin development
GO:0045109 IMP intermediate filament organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019365 zgc:110712 zgc:110712 protein_coding Danio_rerio
ENSDARG00000036830 KRT23 (1 of 2) protein_coding Danio_rerio
ENSDARG00000044973 KRT23 (2 of 2) protein_coding Danio_rerio
ENSMUSG00000051617 Krt9 keratin 9 protein_coding Mus_musculus

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