C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051617 Krt9 10090 - 11:100186781-100193246 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059707 Krt9-001 100186781-100193246 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000059707
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059707 0.033±0.02 2.959±4.15 0.037±0.02 0.029±0.00 0.035±0.00 0.007±0.00 0.037±0.02 0.039±0.00 0.067±0.02 0.020±0.01 0.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TN CIL_0000TN_0006 CGP 11:100140810-100193246
CIL_0000TM CIL_0000TM_0006 CGP 11:100186781-100207548

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005882 IEA intermediate filament
GO:0007283 IMP spermatogenesis
GO:0016020 IEA membrane
GO:0043588 ISS skin development
GO:0045109 ISS intermediate filament organization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019365 zgc:110712 zgc:110712 protein_coding Danio_rerio
ENSDARG00000036830 KRT23 (1 of 2) protein_coding Danio_rerio
ENSDARG00000044973 KRT23 (2 of 2) protein_coding Danio_rerio
ENSG00000171403 KRT9 keratin 9 protein_coding Homo_sapiens

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