C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171431 KRT20 9606 - 17:40875941-40885227 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000167588 KRT20-001 40875941-40885227 protein_coding
  ENST00000482529 KRT20-002 40882463-40884910 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000167588
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000167588 0.030±0.00 0.134±0.00 0.106±0.00 22.245±0.00 101.373±88.58 0.027±0.01 0.021±0.00 1.302±0.00 0.254±0.00 0.122±0.12 0.012±0.00 0.029±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000O CGP 17:40861303-40885227
CIL_0000TN CIL_0000TN_0005 CGP 17:40875941-40937634

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005200 NAS structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005882 NAS:IEA intermediate filament
GO:0006915 IEA apoptotic process
GO:0033554 IEA cellular response to stress
GO:0045109 IMP intermediate filament organization
GO:0050708 IEA regulation of protein secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000212 zgc:92061 zgc:92061 protein_coding Danio_rerio
ENSDARG00000014356 zgc:92035 zgc:92035 protein_coding Danio_rerio
ENSDARG00000022334 BX469912.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000023082 krt1-19d keratin, type 1, gene 19d protein_coding Danio_rerio
ENSDARG00000036832 cyt1l type I cytokeratin, enveloping layer, like protein_coding Danio_rerio
ENSDARG00000036834 zgc:109868 zgc:109868 protein_coding Danio_rerio
ENSDARG00000036840 krt15 keratin 15 protein_coding Danio_rerio
ENSDARG00000044975 zgc:153629 zgc:153629 protein_coding Danio_rerio
ENSDARG00000044976 zgc:136902 zgc:136902 protein_coding Danio_rerio
ENSDARG00000090268 si:dkeyp-113d7.4 si:dkeyp-113d7.4 protein_coding Danio_rerio
ENSDARG00000092947 cyt1 type I cytokeratin, enveloping layer protein_coding Danio_rerio
ENSDARG00000094041 krt17 keratin 17 protein_coding Danio_rerio
ENSDARG00000095147 wu:fb17f05 wu:fb17f05 protein_coding Danio_rerio
ENSMUSG00000035775 Krt20 keratin 20 protein_coding Mus_musculus

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