C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: type I cytokeratin, enveloping layer, like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000036832 cyt1l 7955 - 19:5980624-5982658 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000105024 cyt1l-201 5980626-5982586 protein_coding
  ENSDART00000105034 cyt1l-002 5981714-5982658 retained_intron
  ENSDART00000105036 cyt1l-001 5980624-5982646 protein_coding
  ENSDART00000142096 cyt1l-003 5981448-5982646 nonsense_mediated_decay

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000105024ENSDART00000105034ENSDART00000105036ENSDART00000142096
Transcript ID Brain Heart Kidney Muscle
ENSDART00000105024 0.077±0.00 0.026±0.00 N/A N/A
ENSDART00000105034 N/A N/A 0.020±0.00 N/A
ENSDART00000105036 N/A N/A 0.074±0.00 N/A
ENSDART00000142096 N/A N/A N/A 0.140±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0005 CGP 19:5974115-5982658
CIL_00056U CIL_00056U_0004 CGP 19:5980624-5988852

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000006059 KRT33A keratin 33A protein_coding Homo_sapiens
ENSG00000094796 KRT31 keratin 31 protein_coding Homo_sapiens
ENSG00000108417 KRT37 keratin 37 protein_coding Homo_sapiens
ENSG00000108759 KRT32 keratin 32 protein_coding Homo_sapiens
ENSG00000126337 KRT36 keratin 36 protein_coding Homo_sapiens
ENSG00000128422 KRT17 keratin 17 protein_coding Homo_sapiens
ENSG00000131737 KRT34 keratin 34 protein_coding Homo_sapiens
ENSG00000131738 KRT33B keratin 33B protein_coding Homo_sapiens
ENSG00000167916 KRT24 keratin 24 protein_coding Homo_sapiens
ENSG00000171345 KRT19 keratin 19 protein_coding Homo_sapiens
ENSG00000171346 KRT15 keratin 15 protein_coding Homo_sapiens
ENSG00000171360 KRT38 keratin 38 protein_coding Homo_sapiens
ENSG00000171401 KRT13 keratin 13 protein_coding Homo_sapiens
ENSG00000171431 KRT20 keratin 20 protein_coding Homo_sapiens
ENSG00000171446 KRT27 keratin 27 protein_coding Homo_sapiens
ENSG00000173908 KRT28 keratin 28 protein_coding Homo_sapiens
ENSG00000186393 KRT26 keratin 26 protein_coding Homo_sapiens
ENSG00000186395 KRT10 keratin 10 protein_coding Homo_sapiens
ENSG00000186832 KRT16 keratin 16 protein_coding Homo_sapiens
ENSG00000186847 KRT14 keratin 14 protein_coding Homo_sapiens
ENSG00000187242 KRT12 keratin 12 protein_coding Homo_sapiens
ENSG00000196859 KRT39 keratin 39 protein_coding Homo_sapiens
ENSG00000197079 KRT35 keratin 35 protein_coding Homo_sapiens
ENSG00000204889 KRT40 keratin 40 protein_coding Homo_sapiens
ENSG00000204897 KRT25 keratin 25 protein_coding Homo_sapiens
ENSMUSG00000017588 Krt27 keratin 27 protein_coding Mus_musculus
ENSMUSG00000019761 Krt10 keratin 10 protein_coding Mus_musculus
ENSMUSG00000020911 Krt19 keratin 19 protein_coding Mus_musculus
ENSMUSG00000020912 Krt12 keratin 12 protein_coding Mus_musculus
ENSMUSG00000020913 Krt24 keratin 24 protein_coding Mus_musculus
ENSMUSG00000020916 Krt36 keratin 36 protein_coding Mus_musculus
ENSMUSG00000035557 Krt17 keratin 17 protein_coding Mus_musculus
ENSMUSG00000035592 Krt33a keratin 33A protein_coding Mus_musculus
ENSMUSG00000035775 Krt20 keratin 20 protein_coding Mus_musculus
ENSMUSG00000035831 Krt25 keratin 25 protein_coding Mus_musculus
ENSMUSG00000043485 Krt34 keratin 34 protein_coding Mus_musculus
ENSMUSG00000044041 Krt13 keratin 13 protein_coding Mus_musculus
ENSMUSG00000045545 Krt14 keratin 14 protein_coding Mus_musculus
ENSMUSG00000046095 Krt32 keratin 32 protein_coding Mus_musculus
ENSMUSG00000048013 Krt35 keratin 35 protein_coding Mus_musculus
ENSMUSG00000048981 Krt31 keratin 31 protein_coding Mus_musculus
ENSMUSG00000053654 Krt42 keratin 42 protein_coding Mus_musculus
ENSMUSG00000053797 Krt16 keratin 16 protein_coding Mus_musculus
ENSMUSG00000054146 Krt15 keratin 15 protein_coding Mus_musculus
ENSMUSG00000055937 Krt28 keratin 28 protein_coding Mus_musculus
ENSMUSG00000057723 Krt33b keratin 33B protein_coding Mus_musculus
ENSMUSG00000059169 Krt40 keratin 40 protein_coding Mus_musculus
ENSMUSG00000064165 Krt39 keratin 39 protein_coding Mus_musculus
ENSMUSG00000075570 Krt26 keratin 26 protein_coding Mus_musculus

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