C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035775 Krt20 10090 - 11:99428403-99438150 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000017743 Krt20-001 99428403-99438150 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017743
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017743 0.242±0.11 0.050±0.00 25.582±4.55 0.033±0.03 0.158±0.08 187.556±69.04 0.023±0.01 0.109±0.06 6.999±5.98 0.651±0.10 0.028±0.01 0.577±0.23 8.231±10.70 0.084±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000U CGP 11:99415666-99438150
CIL_0000TN CIL_0000TN_0007 CGP 11:99428403-99493137

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005882 IEA intermediate filament
GO:0006915 IEA apoptotic process
GO:0033554 IDA cellular response to stress
GO:0045109 IMP intermediate filament organization
GO:0050708 IDA regulation of protein secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000212 zgc:92061 zgc:92061 protein_coding Danio_rerio
ENSDARG00000014356 zgc:92035 zgc:92035 protein_coding Danio_rerio
ENSDARG00000022334 BX469912.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000023082 krt1-19d keratin, type 1, gene 19d protein_coding Danio_rerio
ENSDARG00000036832 cyt1l type I cytokeratin, enveloping layer, like protein_coding Danio_rerio
ENSDARG00000036834 zgc:109868 zgc:109868 protein_coding Danio_rerio
ENSDARG00000036840 krt15 keratin 15 protein_coding Danio_rerio
ENSDARG00000044975 zgc:153629 zgc:153629 protein_coding Danio_rerio
ENSDARG00000044976 zgc:136902 zgc:136902 protein_coding Danio_rerio
ENSDARG00000090268 si:dkeyp-113d7.4 si:dkeyp-113d7.4 protein_coding Danio_rerio
ENSDARG00000092947 cyt1 type I cytokeratin, enveloping layer protein_coding Danio_rerio
ENSDARG00000094041 krt17 keratin 17 protein_coding Danio_rerio
ENSDARG00000095147 wu:fb17f05 wu:fb17f05 protein_coding Danio_rerio
ENSG00000171431 KRT20 keratin 20 protein_coding Homo_sapiens

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