C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WAS/WASL interacting protein family, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171475 WIPF2 9606 + 17:40219304-40284136 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000323571 WIPF2-001 40219322-40284136 protein_coding
  ENST00000394103 WIPF2-003 40219357-40279849 protein_coding
  ENST00000494757 WIPF2-002 40219322-40278907 processed_transcript
  ENST00000578304 WIPF2-010 40256388-40260838 retained_intron
  ENST00000578623 WIPF2-012 40273613-40278249 retained_intron
  ENST00000582781 WIPF2-006 40219326-40279869 nonsense_mediated_decay
  ENST00000583130 WIPF2-004 40219790-40278231 protein_coding
  ENST00000583268 WIPF2-011 40219304-40277132 protein_coding
  ENST00000584296 WIPF2-009 40219852-40262638 protein_coding
  ENST00000585043 WIPF2-007 40219349-40279357 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000323571ENST00000582781
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000323571 6.090±0.00 4.378±0.00 1.029±0.00 7.343±5.27 7.240±0.00 3.810±2.02 1.120±0.00 4.619±0.00 0.661±0.08 2.782±2.26 3.380±2.35 4.990±1.08 3.323±1.87
ENST00000582781 N/A N/A N/A N/A 1.180±0.00 0.711±0.00 0.785±0.38 1.085±0.00 1.173±0.00 0.730±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0001 VISTA 17:39768583-40372873
CIL_0002GJ CIL_0002GJ_0001 CGP 17:40177010-40284136
CIL_0002GK CIL_0002GK_0001 CGP 17:40219304-40304657

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0045087 TAS innate immune response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006712 wipf2b WAS/WASL interacting protein family, member 2b protein_coding Danio_rerio
ENSDARG00000045298 WIPF2 (2 of 2) WAS/WASL interacting protein family, member 2 protein_coding Danio_rerio
ENSMUSG00000038013 Wipf2 WAS/WASL interacting protein family, member 2 protein_coding Mus_musculus

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