C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WAS/WASL interacting protein family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000323571 WIPF2-001 ENSG00000171475 9606 + 17:40219322-40284136 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000323571
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000323571 6.090±0.00 4.378±0.00 1.029±0.00 7.343±5.27 7.240±0.00 3.810±2.02 1.120±0.00 4.619±0.00 0.661±0.08 2.782±2.26 3.380±2.35 4.990±1.08 3.323±1.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0001 VISTA 17:39768583-40372873
CIL_0002GJ CIL_0002GJ_0001 CGP 17:40177010-40284136
CIL_0002GK CIL_0002GK_0001 CGP 17:40219304-40304657

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0045087 TAS innate immune response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037480 Wipf2-001 protein_coding Mus_musculus 0 2010
ENSMUST00000132006 Wipf2-002 retained_intron Mus_musculus 0 976
ENSMUST00000142414 Wipf2-004 protein_coding Mus_musculus 0 784
ENSMUST00000146544 Golga2-011 processed_transcript Mus_musculus 0.0005 53

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