C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002GK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171475-ENSG00000094804 CGP 9606 17:40219304-40304657
GeneTranscriptPositionBiotype
ENSG00000094804 (CDC6)
cell division cycle 6 		ENST00000209728 (CDC6-001) 40287633-40304657 protein_coding
ENST00000473555 (CDC6-002) 40289192-40291234 protein_coding
ENST00000577249 (CDC6-004) 40287907-40291181 protein_coding
ENST00000580824 (CDC6-003) 40287902-40291555 protein_coding
ENST00000582402 (CDC6-005) 40291467-40295506 retained_intron
ENSG00000171475 (WIPF2)
WAS/WASL interacting protein family, member 2 		ENST00000323571 (WIPF2-001) 40219322-40284136 protein_coding
ENST00000394103 (WIPF2-003) 40219357-40279849 protein_coding
ENST00000494757 (WIPF2-002) 40219322-40278907 processed_transcript
ENST00000578304 (WIPF2-010) 40256388-40260838 retained_intron
ENST00000578623 (WIPF2-012) 40273613-40278249 retained_intron
ENST00000582781 (WIPF2-006) 40219326-40279869 nonsense_mediated_decay
ENST00000583130 (WIPF2-004) 40219790-40278231 protein_coding
ENST00000583268 (WIPF2-011) 40219304-40277132 protein_coding
ENST00000584296 (WIPF2-009) 40219852-40262638 protein_coding
ENST00000585043 (WIPF2-007) 40219349-40279357 protein_coding
CIL_0002GK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038013-ENSMUSG00000017499 CGP 10090 11:98863638-98923940
GeneTranscriptPositionBiotype
ENSMUSG00000017499 (Cdc6)
cell division cycle 6 		ENSMUST00000092706 (Cdc6-001) 98907801-98923936 protein_coding
ENSMUST00000093937 (Cdc6-002) 98908151-98921893 protein_coding
ENSMUST00000133779 (Cdc6-003) 98907849-98923940 nonsense_mediated_decay
ENSMUST00000135862 (Cdc6-004) 98920466-98921461 retained_intron
ENSMUSG00000038013 (Wipf2)
WAS/WASL interacting protein family, member 2 		ENSMUST00000037480 (Wipf2-001) 98863638-98905040 protein_coding
ENSMUST00000132006 (Wipf2-002) 98864117-98892840 retained_intron
ENSMUST00000142414 (Wipf2-004) 98863638-98892299 protein_coding
ENSMUST00000148439 (Wipf2-003) 98891173-98892097 retained_intron
ENSMUSG00000088485 (Gm23640)
predicted gene, 23640 		ENSMUST00000157860 (Gm23640-201) 98870396-98870499 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002GK_0001ENSG00000094804ENST00000209728ENST00000473555ENST00000577249ENST00000580824ENST00000582402ENSG00000171475ENST00000323571ENST00000394103ENST00000494757ENST00000578304ENST00000578623ENST00000582781ENST00000583130ENST00000583268ENST00000584296ENST00000585043CIL_0002GK_0002ENSMUSG00000017499ENSMUST00000092706ENSMUST00000093937ENSMUST00000133779ENSMUST00000135862ENSMUSG00000038013ENSMUST00000037480ENSMUST00000132006ENSMUST00000142414ENSMUST00000148439ENSMUSG00000088485ENSMUST00000157860
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002GK_0001ENSG00000094804ENST00000209728ENST00000577249ENST00000580824ENST00000582402ENSG00000171475ENST00000323571ENST00000582781CIL_0002GK_0002ENSMUSG00000017499ENSMUST00000092706ENSMUST00000093937ENSMUST00000133779ENSMUST00000135862ENSMUSG00000038013ENSMUST00000037480ENSMUSG00000088485ENSMUST00000157860
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000094804 ENST00000209728 0.104±0.00 N/A N/A 0.412±0.31 0.131±0.00 0.280±0.00 0.101±0.08 0.306±0.00 0.081±0.06 0.126±0.00 0.102±0.00 4.543±5.90 2.671±1.82 2.994±0.84
ENST00000473555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577249 0.339±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.890±0.00 N/A N/A N/A N/A
ENST00000580824 N/A N/A N/A N/A 0.449±0.00 N/A N/A N/A 0.443±0.00 N/A N/A 4.926±0.00 2.180±0.00 N/A
ENST00000582402 N/A N/A N/A N/A N/A N/A N/A 1.498±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000171475 ENST00000323571 6.090±0.00 4.378±0.00 1.029±0.00 7.343±5.27 7.240±0.00 3.810±2.02 1.120±0.00 4.619±0.00 0.661±0.08 2.782±2.26 N/A 3.380±2.35 4.990±1.08 3.323±1.87
ENST00000394103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582781 N/A N/A N/A N/A 1.180±0.00 0.711±0.00 0.785±0.38 1.085±0.00 1.173±0.00 0.730±0.00 N/A N/A N/A N/A
ENST00000583130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017499 ENSMUST00000092706 0.213±0.21 0.076±0.03 0.358±0.00 0.262±0.17 0.059±0.02 0.219±0.13 0.021±0.01 0.034±0.01 1.630±2.07 0.063±0.04 0.033±0.02 0.403±0.17 1.225±0.57 0.185±0.00
ENSMUST00000093937 0.547±0.36 0.159±0.02 1.129±0.21 1.106±0.81 0.237±0.12 0.431±0.15 0.071±0.01 0.068±0.03 12.181±11.18 0.126±0.06 0.057±0.02 1.101±0.87 10.338±10.64 1.278±0.13
ENSMUST00000133779 N/A 0.025±0.01 N/A 0.132±0.00 N/A N/A N/A 0.050±0.00 1.724±1.32 N/A N/A 0.205±0.00 N/A N/A
ENSMUST00000135862 N/A N/A N/A N/A 0.148±0.00 N/A 0.095±0.03 N/A N/A N/A 0.137±0.02 N/A N/A N/A
ENSMUSG00000038013 ENSMUST00000037480 1.453±0.42 1.443±1.48 9.648±0.17 3.629±1.33 2.568±0.89 5.574±2.37 0.695±0.17 2.525±0.59 1.042±0.58 3.635±1.82 0.600±0.23 2.276±1.33 2.217±0.84 1.295±0.82
ENSMUST00000132006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088485 ENSMUST00000157860 N/A N/A N/A N/A 2484.260±0.00 N/A N/A N/A N/A N/A N/A 46.104±0.00 N/A N/A

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