C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CXXC finger protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171604 CXXC5 9606 + 5:139647299-139683882 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302517 CXXC5-001 139648292-139683882 protein_coding
  ENST00000502295 CXXC5-005 139647299-139680729 protein_coding
  ENST00000502336 CXXC5-011 139648925-139680765 protein_coding
  ENST00000502716 CXXC5-014 139675436-139681066 protein_coding
  ENST00000503511 CXXC5-016 139675443-139680773 protein_coding
  ENST00000504844 CXXC5-010 139648712-139681006 protein_coding
  ENST00000504944 CXXC5-006 139647904-139680830 protein_coding
  ENST00000505812 CXXC5-012 139682994-139683578 processed_transcript
  ENST00000507139 CXXC5-009 139648661-139680556 protein_coding
  ENST00000509238 CXXC5-008 139659555-139680818 protein_coding
  ENST00000511048 CXXC5-002 139648933-139683593 protein_coding
  ENST00000511457 CXXC5-017 139675474-139681113 protein_coding
  ENST00000511591 CXXC5-013 139679683-139680547 protein_coding
  ENST00000512816 CXXC5-007 139650989-139680743 protein_coding
  ENST00000515038 CXXC5-015 139680958-139683111 processed_transcript
  ENST00000520967 CXXC5-018 139648929-139680936 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302517ENST00000502295ENST00000511048ENST00000515038ENST00000520967
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302517 2.872±0.00 5.871±0.00 N/A 13.469±7.68 6.622±3.91 3.415±2.11 4.111±3.30 22.662±21.13 14.624±13.84 9.041±7.88 9.276±7.26 2.003±1.41 3.999±0.43 3.270±0.00
ENST00000502295 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.446±0.00 9.463±0.00 4.566±0.00 N/A N/A
ENST00000511048 2.298±0.00 N/A 2.494±0.00 6.585±0.00 3.052±1.90 1.842±0.00 0.414±0.00 2.544±0.00 2.226±0.00 N/A 0.752±0.00 4.550±2.08 5.219±0.00 8.636±0.00
ENST00000515038 N/A N/A 4.136±0.00 N/A N/A N/A 1.267±0.00 N/A N/A N/A 2.986±0.00 N/A N/A 22.565±0.00
ENST00000520967 N/A N/A N/A N/A N/A 2.035±0.00 N/A N/A N/A 1.190±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000549 CIL_000549_0001 CGP 5:139526431-139683882
CIL_00053Z CIL_00053Z_0001 CGP 5:139647299-139844466

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004871 IMP signal transducer activity
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0007165 IMP signal transduction
GO:0008270 IEA zinc ion binding
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075735 CXXC5 (1 of 2) CXXC finger protein 5 protein_coding Danio_rerio
ENSDARG00000078865 cxxc5a CXXC finger 5a protein_coding Danio_rerio
ENSMUSG00000046668 Cxxc5 CXXC finger 5 protein_coding Mus_musculus

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