C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000549_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131508-ENSG00000171604 CGP 9606 5:139526431-139683882
GeneTranscriptPositionBiotype
ENSG00000131508 (UBE2D2)
ubiquitin-conjugating enzyme E2D 2 		ENST00000253815 (UBE2D2-201) 139599562-139626801 protein_coding
ENST00000398733 (UBE2D2-001) 139561166-139628433 protein_coding
ENST00000398734 (UBE2D2-004) 139561726-139627686 nonsense_mediated_decay
ENST00000505007 (UBE2D2-003) 139561167-139623444 protein_coding
ENST00000505548 (UBE2D2-002) 139562029-139627115 protein_coding
ENST00000510470 (UBE2D2-007) 139561724-139614685 retained_intron
ENST00000511691 (UBE2D2-008) 139600404-139623662 retained_intron
ENST00000511725 (UBE2D2-006) 139526431-139626855 protein_coding
ENSG00000171604 (CXXC5)
CXXC finger protein 5 		ENST00000302517 (CXXC5-001) 139648292-139683882 protein_coding
ENST00000502295 (CXXC5-005) 139647299-139680729 protein_coding
ENST00000502336 (CXXC5-011) 139648925-139680765 protein_coding
ENST00000502716 (CXXC5-014) 139675436-139681066 protein_coding
ENST00000503511 (CXXC5-016) 139675443-139680773 protein_coding
ENST00000504844 (CXXC5-010) 139648712-139681006 protein_coding
ENST00000504944 (CXXC5-006) 139647904-139680830 protein_coding
ENST00000505812 (CXXC5-012) 139682994-139683578 processed_transcript
ENST00000507139 (CXXC5-009) 139648661-139680556 protein_coding
ENST00000509238 (CXXC5-008) 139659555-139680818 protein_coding
ENST00000511048 (CXXC5-002) 139648933-139683593 protein_coding
ENST00000511457 (CXXC5-017) 139675474-139681113 protein_coding
ENST00000511591 (CXXC5-013) 139679683-139680547 protein_coding
ENST00000512816 (CXXC5-007) 139650989-139680743 protein_coding
ENST00000515038 (CXXC5-015) 139680958-139683111 processed_transcript
ENST00000520967 (CXXC5-018) 139648929-139680936 protein_coding
ENSG00000272255 (CTD-3224K15.3)
 ENST00000606683 (CTD-3224K15.3-001) 139644460-139645002 lincRNA
ENSG00000275506 (CTD-2062A1.2)
 ENST00000619270 (CTD-2062A1.2-001) 139612002-139612363 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_000549_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000091896-ENSMUSG00000046668 CGP 10090 18:35771559-35861687
GeneTranscriptPositionBiotype
ENSMUSG00000046668 (Cxxc5)
CXXC finger 5 		ENSMUST00000060722 (Cxxc5-201) 35829818-35861687 protein_coding
ENSMUSG00000091896 (Ube2d2a)
ubiquitin-conjugating enzyme E2D 2A 		ENSMUST00000167406 (Ube2d2a-201) 35771602-35807163 protein_coding
ENSMUST00000170693 (Ube2d2a-202) 35771559-35807172 protein_coding
ENSMUSG00000100320 (RP24-326K11.2)
predicted gene 29417 		ENSMUST00000188160 (RP24-326K11.2-001) 35830389-35831093 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000549_0001ENSG00000131508ENST00000253815ENST00000398733ENST00000398734ENST00000505007ENST00000505548ENST00000510470ENST00000511691ENST00000511725ENSG00000171604ENST00000302517ENST00000502295ENST00000502336ENST00000502716ENST00000503511ENST00000504844ENST00000504944ENST00000505812ENST00000507139ENST00000509238ENST00000511048ENST00000511457ENST00000511591ENST00000512816ENST00000515038ENST00000520967ENSG00000272255ENST00000606683ENSG00000275506ENST00000619270CIL_000549_0002ENSMUSG00000046668ENSMUST00000060722ENSMUSG00000091896ENSMUST00000167406ENSMUST00000170693ENSMUSG00000100320ENSMUST00000188160
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000549_0001ENSG00000131508ENST00000253815ENST00000398733ENST00000398734ENST00000505007ENST00000505548ENST00000511691ENST00000511725ENSG00000171604ENST00000302517ENST00000502295ENST00000511048ENST00000515038ENST00000520967ENSG00000272255ENST00000606683ENSG00000275506ENST00000619270CIL_000549_0002ENSMUSG00000046668ENSMUST00000060722ENSMUSG00000091896ENSMUST00000167406ENSMUST00000170693ENSMUSG00000100320ENSMUST00000188160
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131508 ENST00000253815 N/A N/A 10.255±0.00 20.384±0.00 9.036±0.00 16.009±0.00 14.326±5.27 13.000±0.00 18.132±6.02 17.357±2.19 26.437±4.03 42.326±37.93 29.111±0.08 N/A
ENST00000398733 18.497±0.00 23.804±0.00 1.254±0.00 15.449±10.90 9.305±8.44 4.891±0.41 6.627±5.76 8.683±6.41 4.852±2.05 13.385±0.00 9.010±7.88 13.043±9.90 12.588±4.74 22.729±5.75
ENST00000398734 17.986±0.00 26.010±0.00 N/A 22.140±0.00 16.452±0.00 9.221±0.00 4.104±2.81 16.429±0.00 4.347±0.00 7.282±4.69 9.736±0.00 10.701±9.18 16.246±8.84 42.067±2.90
ENST00000505007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.123±0.00 N/A N/A N/A
ENST00000505548 N/A N/A 1.241±0.00 N/A N/A N/A 0.907±0.00 N/A N/A N/A N/A N/A N/A 17.551±0.00
ENST00000510470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511691 N/A N/A N/A N/A 3.960±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.387±0.00 32.986±0.00 68.258±0.00
ENSG00000171604 ENST00000302517 2.872±0.00 5.871±0.00 N/A 13.469±7.68 6.622±3.91 3.415±2.11 4.111±3.30 22.662±21.13 14.624±13.84 9.041±7.88 9.276±7.26 2.003±1.41 3.999±0.43 3.270±0.00
ENST00000502295 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.446±0.00 9.463±0.00 4.566±0.00 N/A N/A
ENST00000502336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511048 2.298±0.00 N/A 2.494±0.00 6.585±0.00 3.052±1.90 1.842±0.00 0.414±0.00 2.544±0.00 2.226±0.00 N/A 0.752±0.00 4.550±2.08 5.219±0.00 8.636±0.00
ENST00000511457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515038 N/A N/A 4.136±0.00 N/A N/A N/A 1.267±0.00 N/A N/A N/A 2.986±0.00 N/A N/A 22.565±0.00
ENST00000520967 N/A N/A N/A N/A N/A 2.035±0.00 N/A N/A N/A 1.190±0.00 N/A N/A N/A N/A
ENSG00000272255 ENST00000606683 N/A 0.026±0.00 N/A 0.173±0.00 N/A 0.449±0.00 N/A 0.131±0.00 N/A 0.503±0.00 N/A 0.044±0.00 0.095±0.00 0.122±0.00
ENSG00000275506 ENST00000619270 0.070±0.00 0.289±0.00 0.812±0.00 0.181±0.00 0.283±0.00 N/A 0.032±0.00 0.105±0.00 0.121±0.00 N/A N/A 0.092±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000046668 ENSMUST00000060722 8.731±4.43 6.870±1.78 5.708±1.94 15.653±5.23 6.889±4.17 3.132±0.91 2.413±0.00 31.451±4.11 9.992±2.85 3.136±1.16 3.566±1.62 8.893±4.91 16.827±6.91 9.782±5.70
ENSMUSG00000091896 ENSMUST00000167406 N/A N/A N/A N/A N/A N/A N/A N/A 2.303±0.43 N/A N/A N/A N/A 1.709±0.00
ENSMUST00000170693 10.067±1.68 17.344±8.74 15.692±5.42 21.455±6.16 10.221±3.19 9.750±2.58 9.278±0.41 9.243±1.81 9.373±5.32 12.672±2.22 16.202±1.85 13.352±10.92 31.667±11.14 19.641±1.79
ENSMUSG00000100320 ENSMUST00000188160 0.247±0.00 0.169±0.03 N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A 0.193±0.05 0.461±0.33 0.188±0.07 0.130±0.04

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