C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: growth associated protein 43
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172020 GAP43 9606 + 3:115623324-115721490 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305124 GAP43-001 115623324-115721490 protein_coding
  ENST00000393780 GAP43-002 115623510-115721490 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000305124ENST00000393780
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000305124 0.026±0.00 1.353±0.00 0.033±0.00 99.659±37.64 0.522±0.00 4.380±3.60 0.181±0.02 0.037±0.00 0.075±0.06 0.368±0.00 0.025±0.01 0.341±0.23 1.383±0.85 0.161±0.14
ENST00000393780 N/A N/A N/A N/A 0.389±0.00 N/A N/A N/A N/A N/A N/A N/A 0.658±0.00 0.056±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L7 CIL_0000L7_0002 CGP 3:115623324-117139389

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007205 TAS protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0007399 IEA nervous system development
GO:0007411 IEA axon guidance
GO:0009611 TAS response to wounding
GO:0010001 IEA glial cell differentiation
GO:0014069 IEA postsynaptic density
GO:0016198 IEA axon choice point recognition
GO:0030054 IEA cell junction
GO:0030424 IEA axon
GO:0031527 IDA filopodium membrane
GO:0040008 IEA regulation of growth
GO:0042246 IEA tissue regeneration
GO:0045165 IEA cell fate commitment
GO:0045202 IEA synapse
GO:0051489 IDA regulation of filopodium assembly
GO:0071944 IEA cell periphery

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015775 gap43 growth associated protein 43 protein_coding Danio_rerio
ENSMUSG00000047261 Gap43 growth associated protein 43 protein_coding Mus_musculus

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