C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000L7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015775-ENSDARG00000091309 CGP 7955 Zv9_NA963:1-31648
GeneTranscriptPositionBiotype
ENSDARG00000015775 (gap43)
growth associated protein 43 		ENSDART00000025036 (gap43-201) 1-14235 protein_coding
ENSDARG00000091309 (LSAMP)
limbic system-associated membrane protein 		ENSDART00000121937 (LSAMP-201) 18828-31648 protein_coding
CIL_0000L7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172020-ENSG00000185565 CGP 9606 3:115623324-117139389
GeneTranscriptPositionBiotype
ENSG00000172020 (GAP43)
growth associated protein 43 		ENST00000305124 (GAP43-001) 115623324-115721490 protein_coding
ENST00000393780 (GAP43-002) 115623510-115721490 protein_coding
ENSG00000185565 (LSAMP)
limbic system-associated membrane protein 		ENST00000333617 (LSAMP-002) 115809794-116444983 protein_coding
ENST00000473171 (LSAMP-004) 115841571-115852578 retained_intron
ENST00000474851 (LSAMP-006) 116019515-117139389 protein_coding
ENST00000475403 (LSAMP-005) 115810276-115842497 processed_transcript
ENST00000490035 (LSAMP-001) 115802388-116445531 protein_coding
ENST00000498645 (LSAMP-003) 115841887-116051252 processed_transcript
ENST00000539563 (LSAMP-201) 115802363-116086561 protein_coding
ENSG00000198406 (BZW1P2)
basic leucine zipper and W2 domains 1 pseudogene 2 		ENST00000473537 (BZW1P2-001) 116645902-116646727 processed_pseudogene
ENSG00000200372 (RNU5E-8P)
RNA, U5E small nuclear 8, pseudogene 		ENST00000363502 (RNU5E-8P-201) 116965112-116965227 snRNA
ENSG00000240922 (LSAMP-AS1)
LSAMP antisense RNA 1 		ENST00000490351 (LSAMP-AS1-001) 116360024-116370090 antisense
ENSG00000241156 (RN7SL582P)
RNA, 7SL, cytoplasmic 582, pseudogene 		ENST00000491078 (RN7SL582P-201) 116582552-116582830 misc_RNA
ENSG00000241596 (RP11-326J18.1)
 ENST00000491321 (RP11-326J18.1-001) 115658533-115661279 sense_intronic
ENSG00000242385 (LINC00901)
long intergenic non-protein coding RNA 901 		ENST00000487512 (LINC00901-001) 116921431-116932238 antisense
ENSG00000243014 (PTMAP8)
prothymosin, alpha pseudogene 8 		ENST00000397729 (PTMAP8-001) 117026698-117027039 processed_pseudogene
ENSG00000243197 (TUSC7)
tumor suppressor candidate 7 (non-protein coding) 		ENST00000466156 (TUSC7-006) 116709969-116716431 antisense
ENST00000466856 (TUSC7-003) 116709833-116716435 antisense
ENST00000477539 (TUSC7-001) 116709406-116717321 antisense
ENST00000477805 (TUSC7-004) 116709779-116723581 antisense
ENST00000496154 (TUSC7-005) 116709235-116712471 antisense
ENST00000496242 (TUSC7-002) 116709969-116716431 antisense
ENST00000609361 (TUSC7-007) 116709759-116716327 antisense
ENSG00000243359 (RN7SL815P)
RNA, 7SL, cytoplasmic 815, pseudogene 		ENST00000470970 (RN7SL815P-201) 115837870-115838159 misc_RNA
ENSG00000265433 (MIR4447)
microRNA 4447 		ENST00000580126 (MIR4447-201) 116850277-116850367 miRNA
ENSG00000274732 (BC040587)
Non-coding RNA BC040587 		ENST00000617252 (BC040587.1-201) 116921328-116921479 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000L7_0001ENSDARG00000015775ENSDART00000025036ENSDARG00000091309ENSDART00000121937CIL_0000L7_0002ENSG00000172020ENST00000305124ENST00000393780ENSG00000185565ENST00000333617ENST00000473171ENST00000474851ENST00000475403ENST00000490035ENST00000498645ENST00000539563ENSG00000198406ENST00000473537ENSG00000200372ENST00000363502ENSG00000240922ENST00000490351ENSG00000241156ENST00000491078ENSG00000241596ENST00000491321ENSG00000242385ENST00000487512ENSG00000243014ENST00000397729ENSG00000243197ENST00000466156ENST00000466856ENST00000477539ENST00000477805ENST00000496154ENST00000496242ENST00000609361ENSG00000243359ENST00000470970ENSG00000265433ENST00000580126ENSG00000274732ENST00000617252
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000L7_0001ENSDARG00000015775ENSDART00000025036ENSDARG00000091309ENSDART00000121937CIL_0000L7_0002ENSG00000172020ENST00000305124ENST00000393780ENSG00000185565ENST00000333617ENST00000474851ENST00000490035ENST00000498645ENST00000539563ENSG00000198406ENST00000473537ENSG00000200372ENST00000363502ENSG00000240922ENST00000490351ENSG00000241156ENST00000491078ENSG00000241596ENST00000491321ENSG00000242385ENST00000487512ENSG00000243014ENST00000397729ENSG00000243197ENST00000466156ENST00000477539ENST00000496154ENST00000496242ENST00000609361ENSG00000243359ENST00000470970ENSG00000265433ENST00000580126ENSG00000274732ENST00000617252
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015775 ENSDART00000025036 N/A N/A N/A 48.610±36.75 N/A N/A 0.188±0.04 0.489±0.00 0.058±0.00 N/A 3.824±0.00 N/A N/A N/A
ENSDARG00000091309 ENSDART00000121937 N/A N/A N/A 28.724±0.00 N/A N/A 0.529±0.00 0.332±0.00 0.053±0.00 N/A 3.041±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172020 ENST00000305124 0.026±0.00 1.353±0.00 0.033±0.00 99.659±37.64 0.522±0.00 4.380±3.60 0.181±0.02 0.037±0.00 0.075±0.06 0.368±0.00 0.025±0.01 0.341±0.23 1.383±0.85 0.161±0.14
ENST00000393780 N/A N/A N/A N/A 0.389±0.00 N/A N/A N/A N/A N/A N/A N/A 0.658±0.00 0.056±0.02
ENSG00000185565 ENST00000333617 N/A N/A 0.190±0.00 N/A N/A N/A N/A N/A N/A N/A 0.053±0.00 N/A 0.745±0.03 N/A
ENST00000473171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474851 N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A N/A N/A N/A
ENST00000475403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490035 0.135±0.00 0.230±0.00 N/A 6.107±0.85 0.706±0.53 1.663±0.76 0.429±0.18 0.291±0.00 N/A 1.020±0.20 N/A 0.477±0.11 0.320±0.12 N/A
ENST00000498645 N/A N/A N/A N/A 5.248±0.00 N/A 3.703±0.00 1.210±0.00 N/A N/A N/A N/A 0.896±0.00 N/A
ENST00000539563 0.054±0.00 0.151±0.00 N/A 13.300±5.77 N/A 2.702±0.00 0.263±0.06 0.302±0.28 N/A 2.829±0.00 N/A 0.430±0.00 N/A 1.470±1.35
ENSG00000198406 ENST00000473537 N/A N/A 0.123±0.00 0.498±0.00 0.302±0.28 0.263±0.00 0.083±0.00 0.636±0.00 0.642±0.00 0.440±0.00 N/A 0.323±0.17 N/A 0.024±0.00
ENSG00000200372 ENST00000363502 N/A N/A N/A 0.163±0.00 N/A N/A N/A N/A N/A 1.189±0.00 N/A N/A N/A N/A
ENSG00000240922 ENST00000490351 N/A N/A N/A 0.094±0.00 N/A 0.084±0.00 N/A N/A N/A N/A N/A 0.163±0.12 0.107±0.00 0.035±0.01
ENSG00000241156 ENST00000491078 0.066±0.00 0.836±0.00 N/A 1.374±0.00 0.072±0.00 0.327±0.00 0.067±0.00 0.354±0.00 N/A N/A N/A 0.400±0.00 N/A N/A
ENSG00000241596 ENST00000491321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00
ENSG00000242385 ENST00000487512 N/A N/A 0.105±0.00 0.325±0.31 N/A 0.079±0.00 0.016±0.00 N/A 0.191±0.00 0.810±0.00 N/A N/A N/A 1.629±0.83
ENSG00000243014 ENST00000397729 0.841±0.00 0.580±0.00 N/A 0.426±0.00 0.805±0.00 0.445±0.00 0.045±0.00 0.352±0.00 0.096±0.00 0.310±0.00 N/A 0.556±0.00 N/A 0.114±0.10
ENSG00000243197 ENST00000466156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A 2.519±0.87
ENST00000466856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477539 N/A N/A 0.156±0.00 N/A 0.045±0.00 0.205±0.00 0.042±0.00 N/A N/A 0.676±0.00 N/A N/A N/A 0.881±0.00
ENST00000477805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496154 N/A N/A N/A 0.910±0.00 N/A N/A N/A N/A 0.407±0.00 N/A N/A N/A N/A N/A
ENST00000496242 N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609361 N/A N/A 0.110±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.438±1.47
ENSG00000243359 ENST00000470970 N/A 0.355±0.00 N/A 0.928±0.55 0.286±0.00 N/A 0.055±0.00 N/A N/A 0.172±0.00 N/A 0.968±0.72 N/A N/A
ENSG00000265433 ENST00000580126 N/A N/A N/A 0.250±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274732 ENST00000617252 N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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