C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172172 MRPL13 9606 - 8:120380761-120445402 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306185 MRPL13-001 120395847-120445386 protein_coding
  ENST00000518696 MRPL13-003 120395437-120445402 nonsense_mediated_decay
  ENST00000518918 MRPL13-005 120413991-120445092 protein_coding
  ENST00000520677 MRPL13-004 120419656-120445099 retained_intron
  ENST00000521648 MRPL13-007 120380761-120414112 nonsense_mediated_decay
  ENST00000522717 MRPL13-006 120395847-120414191 retained_intron
  ENST00000613356 MRPL13-002 120395848-120416079 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306185ENST00000518918
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306185 7.987±0.00 12.994±0.00 3.667±0.00 6.321±0.62 6.026±0.79 10.250±1.34 6.155±1.79 15.094±4.62 4.834±0.00 8.178±0.00 6.389±0.63 19.339±5.98 9.998±2.07 10.525±3.16
ENST00000518918 N/A N/A N/A N/A 8.182±0.00 N/A 9.147±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009J CIL_00009J_0002 CGP 8:120059780-120445402
CIL_00008U CIL_00008U_0002 CGP 8:120380761-120542133

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA:NAS structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0005761 IDA mitochondrial ribosome
GO:0005762 NAS mitochondrial large ribosomal subunit
GO:0005840 IEA ribosome
GO:0006412 IEA:NAS translation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056903 mrpl13 mitochondrial ribosomal protein L13 protein_coding Danio_rerio
ENSMUSG00000022370 Mrpl13 mitochondrial ribosomal protein L13 protein_coding Mus_musculus

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