C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interleukin 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172349 IL16 9606 + 15:81159575-81314058 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302987 IL16-003 81225400-81308798 protein_coding
  ENST00000360547 IL16-009 81182860-81309098 nonsense_mediated_decay
  ENST00000394652 IL16-002 81296913-81309083 protein_coding
  ENST00000394660 IL16-001 81196879-81314058 protein_coding
  ENST00000558332 IL16-005 81299416-81306852 protein_coding
  ENST00000558857 IL16-004 81296988-81306548 nonsense_mediated_decay
  ENST00000559342 IL16-014 81302087-81306457 processed_transcript
  ENST00000559383 IL16-006 81196878-81292917 protein_coding
  ENST00000559388 IL16-201 81296988-81309082 protein_coding
  ENST00000559953 IL16-015 81305746-81306526 retained_intron
  ENST00000560115 IL16-013 81278878-81306548 nonsense_mediated_decay
  ENST00000560230 IL16-016 81296970-81300060 processed_transcript
  ENST00000560241 IL16-007 81182600-81292940 nonsense_mediated_decay
  ENST00000560989 IL16-017 81159575-81182883 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000302987ENST00000360547ENST00000394652ENST00000394660ENST00000558857ENST00000559383ENST00000559388ENST00000560230ENST00000560241
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000302987 0.985±0.00 N/A N/A 0.182±0.00 2.188±0.00 N/A 0.428±0.00 N/A 2.618±0.00 N/A N/A 0.906±0.04 1.230±0.00
ENST00000360547 N/A N/A N/A N/A 0.450±0.00 N/A 0.087±0.00 N/A N/A N/A N/A N/A N/A
ENST00000394652 1.863±0.00 20.424±0.00 N/A 0.296±0.00 3.006±1.53 2.301±0.00 0.194±0.00 1.569±0.00 5.713±0.45 N/A 1.364±0.00 1.979±0.57 2.744±0.00
ENST00000394660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.381±0.00
ENST00000558857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.689±0.00 N/A N/A
ENST00000559383 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.421±0.29 N/A N/A N/A
ENST00000559388 N/A 21.095±0.00 N/A 0.527±0.00 N/A 1.541±0.00 0.707±0.00 1.334±0.00 3.988±0.00 0.325±0.00 3.587±1.28 4.278±0.11 N/A
ENST00000560230 N/A N/A 1.401±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560241 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.921±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CN CIL_0009CN_0001 VISTA 15:80790387-81397930
CIL_00052A CIL_00052A_0002 CGP 15:81159575-81324183

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005125 IEA cytokine activity
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006955 TAS immune response
GO:0016032 IEA viral process
GO:0030595 IEA leukocyte chemotaxis
GO:0050930 IEA induction of positive chemotaxis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039884 CABZ01068274.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000001741 Il16 interleukin 16 protein_coding Mus_musculus

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