C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interleukin 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001741 Il16 10090 - 7:83642848-83745726 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001792 Il16-001 83643064-83735523 protein_coding
  ENSMUST00000131916 Il16-006 83722510-83732407 protein_coding
  ENSMUST00000145610 Il16-003 83642848-83655495 retained_intron
  ENSMUST00000151047 Il16-004 83649576-83655325 retained_intron
  ENSMUST00000153560 Il16-002 83660897-83745726 nonsense_mediated_decay
  ENSMUST00000156553 Il16-005 83722510-83739937 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryTestisENSMUST00000001792ENSMUST00000145610
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENSMUST00000001792 1.124±0.00 N/A 2.086±0.45 0.186±0.00 1.957±0.05 0.841±0.00 0.478±0.05 N/A 1.189±0.00 0.308±0.10 1.465±0.34 0.221±0.11
ENSMUST00000145610 3.990±0.77 1.658±0.19 N/A 0.648±0.00 15.711±3.57 2.098±0.29 2.063±0.33 3.448±1.77 4.456±0.44 0.862±0.67 2.024±0.78 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CN CIL_0009CN_0002 VISTA 7:83511918-84115428

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005125 IDA cytokine activity
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030595 IDA leukocyte chemotaxis
GO:0050930 IDA induction of positive chemotaxis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039884 CABZ01068274.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000172349 IL16 interleukin 16 protein_coding Homo_sapiens

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