C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394652 IL16-002 ENSG00000172349 9606 + 15:81296913-81309083 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000394652
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000394652 1.863±0.00 20.424±0.00 0.296±0.00 3.006±1.53 2.301±0.00 0.194±0.00 1.569±0.00 5.713±0.45 1.364±0.00 1.979±0.57 2.744±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CN CIL_0009CN_0001 VISTA 15:80790387-81397930
CIL_00052A CIL_00052A_0002 CGP 15:81159575-81324183

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006955 TAS immune response
GO:0016032 IEA viral process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000145610 Il16-003 retained_intron Mus_musculus 0 1694
ENSMUST00000001792 Il16-001 protein_coding Mus_musculus 0 1672
ENSMUST00000151047 Il16-004 retained_intron Mus_musculus 0 850
ENSMUST00000117410 Stard5-002 protein_coding Mus_musculus 0 702

Loading