C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thymocyte selection associated
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172673 THEMIS 9606 - 6:127708072-127918631 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368248 THEMIS-201 127708194-127901081 protein_coding
  ENST00000368250 THEMIS-001 127708072-127918540 protein_coding
  ENST00000434358 THEMIS-002 127813577-127900958 protein_coding
  ENST00000537166 THEMIS-202 127708194-127918631 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000368248ENST00000368250ENST00000434358ENST00000537166
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000368248 0.020±0.00 1.142±0.00 N/A 1.418±0.00 0.884±0.00 0.441±0.00 0.065±0.00 0.171±0.00 0.778±0.00 0.002±0.00 0.060±0.03 0.073±0.00 0.028±0.01
ENST00000368250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A
ENST00000434358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.152±0.00 N/A
ENST00000537166 N/A N/A 0.244±0.00 N/A N/A N/A 0.139±0.00 N/A N/A 0.002±0.00 0.103±0.06 N/A 0.040±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EM CIL_0001EM_0002 CGP 6:127519455-127918631
CIL_0001EN CIL_0001EN_0002 CGP 6:127708072-128520674

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005911 IEA cell-cell junction
GO:0008180 ISS COP9 signalosome
GO:0043368 ISS positive T cell selection
GO:0043383 ISS negative T cell selection
GO:0050852 ISS T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010619 themis thymocyte selection associated protein_coding Danio_rerio
ENSMUSG00000049109 Themis thymocyte selection associated protein_coding Mus_musculus

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