C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001EN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000010619-ENSDARG00000063416 CGP 7955 20:1446501-1584159
GeneTranscriptPositionBiotype
ENSDARG00000010619 (themis)
thymocyte selection associated 		ENSDART00000002928 (themis-001) 1446501-1462565 protein_coding
ENSDARG00000063416 (ptprk)
protein tyrosine phosphatase, receptor type, K 		ENSDART00000092508 (ptprk-001) 1464857-1584158 protein_coding
ENSDART00000133369 (ptprk-004) 1465839-1584158 protein_coding
ENSDART00000138059 (ptprk-003) 1467308-1477440 protein_coding
ENSDART00000141156 (ptprk-002) 1477459-1486844 retained_intron
ENSDART00000156787 (ptprk-201) 1465943-1584159 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001EN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172673-ENSG00000152894 CGP 9606 6:127708072-128520674
GeneTranscriptPositionBiotype
ENSG00000172673 (THEMIS)
thymocyte selection associated 		ENST00000368248 (THEMIS-201) 127708194-127901081 protein_coding
ENST00000368250 (THEMIS-001) 127708072-127918540 protein_coding
ENST00000434358 (THEMIS-002) 127813577-127900958 protein_coding
ENST00000537166 (THEMIS-202) 127708194-127918631 protein_coding
ENSG00000224733 (RP1-86D1.5)
 ENST00000458367 (RP1-86D1.5-001) 128500527-128501176 antisense
ENSG00000227112 (RP1-86D1.4)
 ENST00000411489 (RP1-86D1.4-001) 128505125-128506276 antisense
ENSG00000228972 (RP1-86D1.2)
 ENST00000434560 (RP1-86D1.2-001) 128430941-128432768 sense_intronic
ENSG00000274493 (MRPS17P5)
mitochondrial ribosomal protein S17 pseudogene 5 		ENST00000622571 (MRPS17P5-001) 127909833-127910052 processed_pseudogene
ENSG00000279776 (RP1-86D1.3)
 ENST00000623752 (RP1-86D1.3-001) 128447398-128449301 TEC

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001EN_0001ENSDARG00000010619ENSDART00000002928ENSDARG00000063416ENSDART00000092508ENSDART00000133369ENSDART00000138059ENSDART00000141156ENSDART00000156787CIL_0001EN_0002ENSG00000172673ENST00000368248ENST00000368250ENST00000434358ENST00000537166ENSG00000224733ENST00000458367ENSG00000227112ENST00000411489ENSG00000228972ENST00000434560ENSG00000274493ENST00000622571ENSG00000279776ENST00000623752
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001EN_0001ENSDARG00000010619ENSDART00000002928ENSDARG00000063416ENSDART00000092508ENSDART00000133369CIL_0001EN_0002ENSG00000172673ENST00000368248ENST00000368250ENST00000434358ENST00000537166ENSG00000224733ENST00000458367ENSG00000227112ENST00000411489ENSG00000228972ENST00000434560ENSG00000274493ENST00000622571ENSG00000279776ENST00000623752
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010619 ENSDART00000002928 N/A N/A N/A 0.304±0.20 N/A N/A 0.716±0.26 0.910±0.59 0.029±0.00 N/A 0.178±0.00 N/A N/A N/A
ENSDARG00000063416 ENSDART00000092508 N/A N/A N/A 6.873±4.32 N/A N/A 2.092±1.30 3.550±2.26 0.284±0.00 N/A 2.465±0.00 N/A N/A N/A
ENSDART00000133369 N/A N/A N/A 2.407±0.00 N/A N/A 0.791±0.43 N/A 0.200±0.00 N/A N/A N/A N/A N/A
ENSDART00000138059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172673 ENST00000368248 0.020±0.00 1.142±0.00 N/A 1.418±0.00 0.884±0.00 0.441±0.00 0.065±0.00 0.171±0.00 N/A 0.778±0.00 0.002±0.00 0.060±0.03 0.073±0.00 0.028±0.01
ENST00000368250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A
ENST00000434358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.152±0.00 N/A
ENST00000537166 N/A N/A 0.244±0.00 N/A N/A N/A 0.139±0.00 N/A N/A N/A 0.002±0.00 0.103±0.06 N/A 0.040±0.00
ENSG00000224733 ENST00000458367 0.085±0.00 0.245±0.00 N/A 0.120±0.01 0.212±0.00 N/A 0.039±0.00 3.427±0.00 0.017±0.00 N/A N/A 3.405±4.64 N/A N/A
ENSG00000227112 ENST00000411489 N/A 0.233±0.00 N/A 0.772±0.67 1.047±0.95 6.136±0.00 1.032±0.97 1.349±0.00 0.855±0.00 0.181±0.00 0.029±0.00 N/A N/A 0.030±0.00
ENSG00000228972 ENST00000434560 0.016±0.00 0.063±0.00 N/A 0.107±0.05 0.233±0.18 0.113±0.05 0.079±0.05 0.184±0.13 0.063±0.05 0.008±0.00 0.061±0.00 0.622±0.59 0.056±0.00 0.034±0.02
ENSG00000274493 ENST00000622571 N/A 0.099±0.00 N/A N/A 0.826±0.00 N/A N/A N/A N/A 3.188±0.00 N/A N/A N/A N/A
ENSG00000279776 ENST00000623752 0.031±0.00 0.067±0.00 0.096±0.00 0.059±0.02 0.246±0.15 0.058±0.04 0.216±0.16 0.264±0.12 0.257±0.22 0.106±0.05 0.011±0.00 0.821±1.05 0.018±0.00 0.103±0.05

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