C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADAM metallopeptidase with thrombospondin type 1 motif, 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173157 ADAMTS20 9606 - 12:43353866-43551921 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000389420 ADAMTS20-001 43353866-43551921 protein_coding
  ENST00000395541 ADAMTS20-201 43423576-43551921 protein_coding
  ENST00000549670 ADAMTS20-003 43422819-43439712 protein_coding
  ENST00000553158 ADAMTS20-002 43423576-43551921 protein_coding
  ENST00000615814 ADAMTS20-202 43354209-43551921 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartOvaryPlacentaTestisENST00000389420ENST00000549670ENST00000553158ENST00000615814
Transcript ID Brain Colon Heart Ovary Placenta Testis
ENST00000389420 N/A N/A N/A N/A 0.028±0.00 N/A
ENST00000549670 0.004±0.00 0.045±0.00 N/A 0.010±0.00 0.013±0.00 0.056±0.00
ENST00000553158 0.021±0.00 N/A N/A N/A 0.031±0.00 N/A
ENST00000615814 N/A N/A 0.034±0.00 N/A N/A 0.073±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R4 CIL_0006R4_0001 CGP 12:42456754-43551921
CIL_0006R3 CIL_0006R3_0001 CGP 12:43353866-43758817

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004175 IEA endopeptidase activity
GO:0004222 IEA metalloendopeptidase activity
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0009967 IEA positive regulation of signal transduction
GO:0030198 IEA extracellular matrix organization
GO:0031012 TAS:IEA extracellular matrix
GO:0043066 IEA negative regulation of apoptotic process
GO:0045636 IEA positive regulation of melanocyte differentiation
GO:0048070 IEA regulation of developmental pigmentation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074281 ADAM metallopeptidase with thrombospondin type 1 motif, 20 protein_coding Danio_rerio
ENSMUSG00000022449 Adamts20 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20 protein_coding Mus_musculus

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