C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: up-regulated during skeletal muscle growth 5 homolog (mouse)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173915 USMG5 9606 - 10:103389041-103396466 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309579 USMG5-002 103389050-103396466 protein_coding
  ENST00000337003 USMG5-003 103389050-103396466 protein_coding
  ENST00000369811 USMG5-005 103389050-103396074 protein_coding
  ENST00000369815 USMG5-001 103389050-103396441 protein_coding
  ENST00000369825 USMG5-004 103389041-103396023 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309579ENST00000337003ENST00000369811ENST00000369815
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309579 51.077±0.00 47.036±0.00 24.376±0.00 157.650±77.02 74.519±46.05 70.625±0.33 192.127±70.09 102.343±15.39 109.390±19.84 50.710±35.32 95.343±25.76 93.694±34.28 78.800±39.46 55.961±0.00
ENST00000337003 N/A N/A N/A 16.404±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 9.291±0.00 N/A
ENST00000369811 N/A N/A N/A N/A 3.796±0.00 5.879±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000369815 N/A N/A N/A N/A N/A 10.340±0.00 N/A 17.265±0.00 N/A 12.454±0.00 8.860±0.00 13.032±6.52 N/A 19.077±2.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065U CIL_00065U_0001 CGP 10:103302796-103389065
CIL_0001HK CIL_0001HK_0002 CGP 10:103367967-103396466
CIL_00039E CIL_00039E_0002 CGP 10:103389041-103446292

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0005753 ISS mitochondrial proton-transporting ATP synthase complex
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000096003 USMG5 up-regulated during skeletal muscle growth 5 homolog (mouse) protein_coding Danio_rerio
ENSMUSG00000071528 Usmg5 upregulated during skeletal muscle growth 5 protein_coding Mus_musculus

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