C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GLIS family zinc finger 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174332 GLIS1 9606 - 1:53506237-53734204 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312233 GLIS1-001 53506237-53734204 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000312233
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000312233 1.010±0.00 0.101±0.00 0.346±0.06 0.125±0.00 0.041±0.00 0.039±0.00 0.999±0.00 0.149±0.00 0.091±0.00 0.235±0.00 0.122±0.05 1.155±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083F CIL_00083F_0001 VISTA 1:53245555-53849135
CIL_0006WD CIL_0006WD_0002 CGP 1:53506237-53838860

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0000977 IEA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001227 IEA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001228 IEA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0005634 ISS nucleus
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 ISS transcription from RNA polymerase II promoter
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027933 glis1b GLIS family zinc finger 1b protein_coding Danio_rerio
ENSDARG00000068580 glis1a GLIS family zinc finger 1a protein_coding Danio_rerio
ENSMUSG00000034762 Glis1 GLIS family zinc finger 1 protein_coding Mus_musculus

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