C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006WD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068580-ENSDARG00000021120 CGP 7955 2:26677617-26738798
GeneTranscriptPositionBiotype
ENSDARG00000021120 (ndc1)
NDC1 transmembrane nucleoporin
ENSDART00000025120 (ndc1-001) 26725023-26738798 protein_coding
ENSDART00000140005 (ndc1-002) 26725806-26727145 retained_intron
ENSDARG00000068580 (glis1a)
GLIS family zinc finger 1a
ENSDART00000099228 (glis1a-201) 26697411-26711800 protein_coding
ENSDART00000150016 (glis1a-001) 26677617-26712148 protein_coding
CIL_0006WD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174332-ENSG00000058804 CGP 9606 1:53506237-53838860
GeneTranscriptPositionBiotype
ENSG00000058804 (NDC1)
NDC1 transmembrane nucleoporin
ENST00000371429 (NDC1-001) 53765460-53838860 protein_coding
ENST00000480952 (NDC1-002) 53818970-53838463 processed_transcript
ENSG00000174332 (GLIS1)
GLIS family zinc finger 1
ENST00000312233 (GLIS1-001) 53506237-53734204 protein_coding
ENSG00000201003 (SNORA58)
Small nucleolar RNA SNORA58
ENST00000364133 (SNORA58.1-201) 53771018-53771153 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006WD_0001ENSDARG00000021120ENSDART00000025120ENSDART00000140005ENSDARG00000068580ENSDART00000099228ENSDART00000150016CIL_0006WD_0002ENSG00000058804ENST00000371429ENST00000480952ENSG00000174332ENST00000312233ENSG00000201003ENST00000364133
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006WD_0001ENSDARG00000021120ENSDART00000025120ENSDARG00000068580ENSDART00000099228ENSDART00000150016CIL_0006WD_0002ENSG00000058804ENST00000371429ENST00000480952ENSG00000174332ENST00000312233ENSG00000201003ENST00000364133
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021120 ENSDART00000025120 N/A N/A N/A 5.598±0.87 N/A N/A 6.744±1.92 16.129±3.24 2.467±0.00 N/A 3.240±0.00 N/A N/A N/A
ENSDART00000140005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000068580 ENSDART00000099228 N/A N/A N/A N/A N/A N/A 0.461±0.00 0.291±0.00 N/A N/A 0.276±0.00 N/A N/A N/A
ENSDART00000150016 N/A N/A N/A 0.209±0.09 N/A N/A 0.096±0.00 0.165±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000058804 ENST00000371429 1.680±0.00 0.287±0.00 0.702±0.00 1.544±1.04 0.705±0.14 1.203±0.64 0.466±0.07 1.327±0.94 1.399±0.00 0.561±0.00 N/A 2.483±1.23 1.983±1.07 2.930±1.10
ENST00000480952 N/A N/A 2.430±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174332 ENST00000312233 1.010±0.00 0.101±0.00 N/A 0.346±0.06 0.125±0.00 0.041±0.00 0.039±0.00 0.999±0.00 0.149±0.00 0.091±0.00 N/A 0.235±0.00 0.122±0.05 1.155±0.43
ENSG00000201003 ENST00000364133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.451±0.00

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